DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5853 and abcg4b

DIOPT Version :9

Sequence 1:NP_001260309.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_001104682.1 Gene:abcg4b / 794238 ZFINID:ZDB-GENE-080215-10 Length:644 Species:Danio rerio


Alignment Length:640 Identity:270/640 - (42%)
Similarity:398/640 - (62%) Gaps:38/640 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 GNEPSKQPPLEPVVEEEVHF-DTDALNNLPAREPVDMEFKELSLTVKLG---FNRGSKEILHNVC 130
            |::|.:.|.|..:.:.|.|. :....::||.|..|::|||||..|::.|   ..:|.|.:|..:.
Zfish    23 GSQPQEAPLLTHLKKVENHITEAQRFSHLPKRTTVELEFKELCYTIREGPWWKKQGYKALLKCLS 87

  Fly   131 GKFPGSQLIAIMGPSGAGKSTLLDALSGFKTTGVDGSILLNGRRRDLPSFRRMSCYITQDDRLQP 195
            |||...:||.||||||||||||::.|:|::.||:.|.||:||:.||..:||:|||||.|:|:|.|
Zfish    88 GKFSSRELIGIMGPSGAGKSTLMNILAGYRETGMTGQILVNGKLRDPRTFRKMSCYIMQEDKLLP 152

  Fly   196 LLTVNENMHIAADLKLGQTVSYEEKESRIEDILLLLGLYNHDQTLTMRLSGGQKKRLSIAMELIN 260
            .|:|.|.|.::|:|||.:  |.|.|:..|::||..|||:....|.|:.|||||.|||:||:||:|
Zfish   153 HLSVQEAMMVSANLKLNE--SSEVKKELIKEILTALGLHECVHTRTVSLSGGQCKRLAIALELVN 215

  Fly   261 NPTVMFLDEPTTGLDSSSCTKVLELLKKLTSQGRTIICTIHQPTAKLFQIFDQVYVLSAGNCVYQ 325
            ||.|||.||||:||||:||.:|:.|:|.|...|||||||||||:||||::||::|:||.|.|:|:
Zfish   216 NPPVMFFDEPTSGLDSASCFQVVSLMKSLAQGGRTIICTIHQPSAKLFEMFDKLYILSQGQCIYK 280

  Fly   326 GSTQKLVPFLQSVDLPCPMYHNPADYIIELACGEYGYDKVDTLKLATENGSCLTWFHNPSAVLRA 390
            ||...|:|:|:.:.|.||.||||||:|||:|.|||| |....|..|.:.|.|             
Zfish   281 GSVPYLIPYLRGLGLHCPTYHNPADFIIEVASGEYG-DLNPVLFEAVQGGMC------------- 331

  Fly   391 EVLMRKYPIPKKT-----KSRSLED----------TSYSNQCSVLLRRGFIKAKRDTTMTHLRIG 440
             .|..|.....||     .::.::|          ||...|..:|.:|.||...||..:||||:.
Zfish   332 -ALEEKCNCIDKTTVTSCAAKCVKDPGHVESHTFATSSLTQFCILFKRTFITICRDQVLTHLRLM 395

  Fly   441 VNIAVAALFGAMYDHTGREGSRVLDNYNLLFAILMHHSMTTMMLTVLTFPMDISILIKEHFNRWY 505
            .:|::..|.|.:|.:.|.:.|:|.:|...||..::......:|.||||||:::::.::||.|.||
Zfish   396 SHISIGVLIGLLYLNIGNDASKVFNNTGFLFFSMLFLMFGALMPTVLTFPLEMAVFLREHLNYWY 460

  Fly   506 SLKAYYTAMTLVDLPISIISCFFFTVIVYLWSYQPMEWIRFFMFFSISLLTVFVGHSFGLMIGAW 570
            ||||||.|.|:.|:|..::....:..|||..:.||.|..|:.:|.::|:.|..|..|.||::||.
Zfish   461 SLKAYYLAKTMADIPFQVLCPIMYCSIVYWMTEQPPEASRYLLFLALSICTALVAQSLGLLVGAA 525

  Fly   571 FDVVN-GTFLAPVLTIPMMMFAGFGVTLRDLPSYLRWGSHISYLRYGLEGFISAIYGLDRGTLAC 634
            ...:. .||:.||..||:::|:||.|....:|.||:|.|::||:|||.|..|.:|||::|....|
Zfish   526 STSLQVATFVGPVTGIPVLLFSGFFVNFDTIPEYLQWSSYVSYVRYGFEEVILSIYGMNRTEREC 590

  Fly   635 EEAPYCHYRYPKKFLEEITMRGDQFWNDVIALGVMILVFRFVSYVVLKAKIKSIR 689
             ....|.::.|::.|:.:.:...:.:.|.|.||:..::.|..:||||:.||||.|
Zfish   591 -PGRVCKFQRPEEVLQLLDVEDAKLYMDFIVLGIFFVILRLATYVVLRYKIKSER 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_001260309.1 3a01204 97..689 CDD:273361 263/610 (43%)
ABCG_EPDR 102..326 CDD:213180 124/226 (55%)
ABC2_membrane 420..623 CDD:279410 80/203 (39%)
abcg4bNP_001104682.1 3a01204 42..644 CDD:273361 263/619 (42%)
ABCG_EPDR 57..281 CDD:213180 124/225 (55%)
ABC2_membrane 375..574 CDD:279410 78/198 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 131 1.000 Domainoid score I5116
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177791at33208
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 1 1.000 - - otm25175
orthoMCL 1 0.900 - - OOG6_100076
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R138
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.810

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