DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5853 and abcg5

DIOPT Version :9

Sequence 1:NP_001260309.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_001122162.1 Gene:abcg5 / 557317 ZFINID:ZDB-GENE-050517-40 Length:652 Species:Danio rerio


Alignment Length:574 Identity:166/574 - (28%)
Similarity:272/574 - (47%) Gaps:62/574 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 SKEILHNVCGKFPGSQLIAIMGPSGAGKSTLLDALSG--FKTTGVDGSILLNGRRRDLPSFRRMS 184
            :::||:.|.......|::.|:|.||:||:|||||::|  ..:..:.|.:.:|||:.....|:...
Zfish    69 TRQILNEVSFHLDSGQIMGILGNSGSGKTTLLDAIAGRIGNSGNLQGEVFVNGRKLKREQFQDCF 133

  Fly   185 CYITQDDRLQPLLTVNENMHIAADLKLGQTVSYEEKESRIEDIL--LLLGLYNHD---QTLTMRL 244
            .|:.|.|.|...|||.|.:...|.|.| :..|.|....::..::  |.||...|.   ..:...:
Zfish   134 SYVLQSDNLLSYLTVEETLTYTAQLAL-RKHSAEAIRKKVTAVMAELSLGHVAHSVIGGRVFPGI 197

  Fly   245 SGGQKKRLSIAMELINNPTVMFLDEPTTGLDSSSCTKVLELLKKLTSQGRTIICTIHQPTAKLFQ 309
            |||:::|:|||.:|:.:|.|:.||||||||||.:..:::.||.:|..:.|.:|.|||||.::||:
Zfish   198 SGGERRRVSIASQLLQDPKVILLDEPTTGLDSMTANQIVMLLAELARRDRIVIVTIHQPRSELFR 262

  Fly   310 IFDQVYVLSAGNCVYQGSTQKLVPFLQSVDLPCPMYHNPADYIIELA-----CGE---YGYDKVD 366
            ||:::.::|.|..|:.|...|:|.|..|....||.|.||.|..::|.     |.|   ..|.::.
Zfish   263 IFNRIAIMSQGELVFCGEPHKMVDFFSSCGYECPEYCNPFDIYVDLTSVDTRCSEREAATYRRMH 327

  Fly   367 TLKLATENGSCLTWFHNPSAVLRAEVLMRKYP-IPKKTKSRSLEDTSYSNQCSVLLRRGFIKAKR 430
            .:..|.:|....|   |....:.........| ||.|:|    |..:..::..|||||.|....|
Zfish   328 DITSAYQNSEIYT---NMQEKIEQSCQRPDKPMIPFKSK----ESPNCISKLGVLLRRTFRNVSR 385

  Fly   431 DTTMTHLRIGVNIAVAALFGAMYDHTGREGSR--VLDNYNLLFAILMHHSMTTMMLTVLTFPMDI 493
            |.....:|:..|:.............|::.::  |.|...|::..:.....|.|:..|..||...
Zfish   386 DRMGILMRLSQNLIYGLFIAFFLMRLGKDVTKGAVQDRIGLIYQSMGASPYTGMLNAVALFPALR 450

  Fly   494 SILIKEH----FNRWYSLKAYYTAMTLVDLPISIISCFFFTVIVYLWS--YQPMEWIRFFMFFSI 552
            :|..:|.    :.:|....||...:    ||.||||.|.|...:| |:  ..| :.:||..|.::
Zfish   451 AISDQESKDGLYQKWQMFLAYIIHI----LPFSIISVFIFASFLY-WTVGMNP-DPVRFLCFSAV 509

  Fly   553 SLLTVFVGHSFGL-MIGAWFD---VVNGTFLAPVLTIPMMMFAGFGVTLRDLPSYLRWGSHISYL 613
            .::...:|....| ::|...|   |.:|..|..:..|  |:.:||....:.:|...:|.|::::.
Zfish   510 VMVPHIIGELLTLVLLGVVQDPNMVNSGVALLNIAGI--MVGSGFLRGFKQMPVVFQWLSYLTFQ 572

  Fly   614 RYGLEGFI-SAIYGL----------------DRGTLACEEA-PYCHYRYPKKFL 649
            :||.|..| :..|||                |.|.:..::. |....||.:.||
Zfish   573 KYGCELLIVTEFYGLNFTCTPIAGLPGECLVDSGNMIIDQGYPGALSRYTQDFL 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_001260309.1 3a01204 97..689 CDD:273361 166/574 (29%)
ABCG_EPDR 102..326 CDD:213180 75/210 (36%)
ABC2_membrane 420..623 CDD:279410 55/215 (26%)
abcg5NP_001122162.1 3a01204 50..645 CDD:273361 166/574 (29%)
ABCG_White 53..279 CDD:213201 75/210 (36%)
ABC2_membrane 375..582 CDD:279410 55/214 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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