DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5853 and abcg1

DIOPT Version :10

Sequence 1:NP_788019.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_001103924.1 Gene:abcg1 / 556979 ZFINID:ZDB-GENE-070424-84 Length:673 Species:Danio rerio


Alignment Length:689 Identity:287/689 - (41%)
Similarity:412/689 - (59%) Gaps:58/689 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 YNSTTVP---VGNSGGWRNAQSSVTPPPIPTPPQV------NYTNGNEPSKQPPLEPVVEEEVHF 89
            :|:|||.   :.|:.|         ||.:...|:.      ...:.:..|:|.||.....::|..
Zfish    10 FNNTTVTNSIIMNTNG---------PPDLMLDPRTVCVSIDEMMSNHVSSQQTPLLHAHLKKVEN 65

  Fly    90 D-TDA--LNNLPAREPVDMEFKELSLTVKLG---FNRGSKEILHNVCGKFPGSQLIAIMGPSGAG 148
            : |:|  .:.||.|..|::|||:||.:|..|   ..:|.|.:|..:.|.|.|..|:|||||||||
Zfish    66 NLTEAQRFSYLPRRPAVNIEFKDLSYSVPEGPWWRKKGYKTLLKGISGNFTGGALVAIMGPSGAG 130

  Fly   149 KSTLLDALSGFKTTGVDGSILLNGRRRDLPSFRRMSCYITQDDRLQPLLTVNENMHIAADLKLGQ 213
            ||||::.|:|::.||:.|.||:||..|||.|||::||||.|||.|.|.|||.|.|.::|:|||  
Zfish   131 KSTLMNILAGYRETGMKGEILINGHPRDLRSFRKVSCYIMQDDMLLPHLTVQEAMMVSANLKL-- 193

  Fly   214 TVSYEEKESR---IEDILLLLGLYNHDQTLTMRLSGGQKKRLSIAMELINNPTVMFLDEPTTGLD 275
               .|:.|.|   :.:||..|||....:|.|..|||||:|||:||:||:|||.|||.||||:|||
Zfish   194 ---QEKDEGRREMVREILTALGLLECAKTRTSHLSGGQRKRLAIALELVNNPPVMFFDEPTSGLD 255

  Fly   276 SSSCTKVLELLKKLTSQGRTIICTIHQPTAKLFQIFDQVYVLSAGNCVYQGSTQKLVPFLQSVDL 340
            ||||.:|:.|:|.|...|||:|||||||:||:|::||::||||.|.|:|:|....|:|:|:.:.|
Zfish   256 SSSCFQVVSLMKALAQGGRTVICTIHQPSAKVFELFDKLYVLSQGQCIYRGKVSSLIPYLRDLGL 320

  Fly   341 PCPMYHNPADYIIELACGEYGYDKVDTLKLATENGSCLTWF---------HNPSAVLRAEVLMRK 396
            .||.||||||:|:|:|.|||| |:...|..|.:...|...:         |||....|       
Zfish   321 SCPTYHNPADFIMEVASGEYG-DQTARLVKAVQEHKCEKDYKTEMNGNGVHNPFLWHR------- 377

  Fly   397 YPIPKKTKSRSLEDT-SYSNQC----SVLLRRGFIKAKRDTTMTHLRIGVNIAVAALFGAMYDHT 456
               |...:|.|.|.. |:|..|    .:|.:|.|:...||:.:|||||..::.:..|.|.:|...
Zfish   378 ---PSDEESSSSEGCHSFSASCLTQFCILFKRTFLSIMRDSVLTHLRIMSHLGIGILIGLLYLGI 439

  Fly   457 GREGSRVLDNYNLLFAILMHHSMTTMMLTVLTFPMDISILIKEHFNRWYSLKAYYTAMTLVDLPI 521
            |.|..:||.|...||..::......:|.||||||:::.:.::||.|.||||||||.|.|:.|:|.
Zfish   440 GNEAKKVLSNSGFLFFSMLFLMFAALMPTVLTFPLEMGVFLREHLNYWYSLKAYYLAKTMADVPF 504

  Fly   522 SIISCFFFTVIVYLWSYQPMEWIRFFMFFSISLLTVFVGHSFGLMIGAWFDVVN-GTFLAPVLTI 585
            .|:....:..|||..:.||.:.:||.:|.::..||..|..|.||:|||....:. .||:.||..|
Zfish   505 QIVFPVAYCSIVYWMTSQPSDAVRFILFLALGTLTSLVAQSLGLLIGAASTSLQVATFVGPVTAI 569

  Fly   586 PMMMFAGFGVTLRDLPSYLRWGSHISYLRYGLEGFISAIYGLDRGTLACEEAPYCHYRYPKKFLE 650
            |:::|:||.|:...:|.||:|.|:|||:|||.||.|.:||||||..|.|::...||::..:..|:
Zfish   570 PVLLFSGFFVSFDTIPKYLQWISYISYVRYGFEGVILSIYGLDREDLHCDKDETCHFQKSEAILK 634

  Fly   651 EITMRGDQFWNDVIALGVMILVFRFVSYVVLKAKIKSIR 689
            |:.:...:.:.|.|.||:..:..|.::|.||:.||.:.|
Zfish   635 ELDVEDAKLYMDFIVLGIFFISLRLIAYFVLRYKISAER 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_788019.1 3a01204 97..689 CDD:273361 270/612 (44%)
abcg1NP_001103924.1 3a01204 67..673 CDD:273361 272/621 (44%)

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