DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5853 and st

DIOPT Version :9

Sequence 1:NP_001260309.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster


Alignment Length:684 Identity:190/684 - (27%)
Similarity:321/684 - (46%) Gaps:76/684 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 VPVGNSGGWRNAQSSVTPPPIPTPPQVNYTNGNEPSKQPPLEPVVEEEVHFDTDALNNLPAREPV 103
            :|||         |::..|.:.:.|:::..|.:|.|.  ||....:..           |..:..
  Fly    25 MPVG---------STIEVPSLDSTPKLSKRNSSERSL--PLRSYSKWS-----------PTEQGA 67

  Fly   104 DMEFKELSLTVKLGFNRGS----KEILHNVCGKFPGSQLIAIMGPSGAGKSTLLDALSGFKTTG- 163
            .:.:::|.:...:|   ||    |.|::|..|......|:|:||.||:||:||:..|:..:..| 
  Fly    68 TLVWRDLCVYTNVG---GSGQRMKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGT 129

  Fly   164 -VDGSILLNGRRRDLPSFRRMSCYITQDDRLQPLLTVNENMHIAADLKLGQTVSYEEKESRIEDI 227
             |.|.||:||||.. |...|:|.|:.|||.....|||.|:::..|.|:|.:.||.||:...|:::
  Fly   130 VVQGDILINGRRIG-PFMHRISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKEL 193

  Fly   228 LLLLGLYNHDQTL------TMRLSGGQKKRLSIAMELINNPTVMFLDEPTTGLDSSSCTKVLELL 286
            |...||.:..||.      ...||||::|||:.|:||:|||.::|.|||||||||.|..:::..|
  Fly   194 LERTGLLSAAQTRIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATL 258

  Fly   287 KKLTSQGRTIICTIHQPTAKLFQIFDQVYVLSAGNCVYQGSTQKLVPFLQSVDLPCPMYHNPADY 351
            .:|..:|.||:||||||:::||..|:.|.:|:.|...:.||.|..:.|..:....||..:||||:
  Fly   259 YELAQKGTTILCTIHQPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADF 323

  Fly   352 IIELACGEYGYDKVDTLKLATENGS---CLTWFHNPSAVLRAEVLM-------RKYPIPKKTKSR 406
            :|.:...:.||::      |::..:   | ..|...||..:.::|:       :....|..|:..
  Fly   324 LIGVLATDPGYEQ------ASQRSAQHLC-DQFAVSSAAKQRDMLVNLEIHMAQSGNFPFDTEVE 381

  Fly   407 SLEDTSYSNQCSVLLRRGFIKAKRDTTMTHLRIGVNIAVAALFGAMYDHTGREGSR--VLDNYNL 469
            |....::..:..|:..|..:...||.|:..||....||:|.:.||.:..| .|.|:  |......
  Fly   382 SFRGVAWYKRFHVVWLRASLTLLRDPTIQWLRFIQKIAMAFIIGACFAGT-TEPSQLGVQAVQGA 445

  Fly   470 LFAILMHHSMTTMMLTVLTFPMDISILIKEHFNRWYSLKAYYTAMTLVDLPISIISCFFFTVIVY 534
            ||.::..::...|...:..||....:.::|..:..||...||.|..|..||..||....|.:|.|
  Fly   446 LFIMISENTYHPMYSVLNLFPQGFPLFMRETRSGLYSTGQYYAANILALLPGMIIEPLIFVIICY 510

  Fly   535 LWSYQPMEWI----RFFMFFSISLLTVFVGHSFGLMIGAWFDVV-NGTFLAPVLTIPM----MMF 590
                    |:    ..|..|.::.:.|.:..:.....|.:|... |...||....:|:    |:.
  Fly   511 --------WLTGLRSTFYAFGVTAMCVVLVMNVATACGCFFSTAFNSVPLAMAYLVPLDYIFMIT 567

  Fly   591 AGFGVTLRDLPSYLRWGSHISYLRYGLEGFISAIY-GLDRGTLACEEAPYCHYRYPKKFLEEITM 654
            :|..:.:..||....|...:|::.|..|...:|.: |:...|...|.|....:...:..|::.:.
  Fly   568 SGIFIQVNSLPVAFWWTQFLSWMLYANEAMTAAQWSGVQNITCFQESADLPCFHTGQDVLDKYSF 632

  Fly   655 RGDQFWNDVIALGVMILVFRFVSYVVLKAKIKSI 688
            .....:.:::|:..:...|..:.|..|..:.:.:
  Fly   633 NESNVYRNLLAMVGLYFGFHLLGYYCLWRRARKL 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_001260309.1 3a01204 97..689 CDD:273361 179/626 (29%)
ABCG_EPDR 102..326 CDD:213180 93/235 (40%)
ABC2_membrane 420..623 CDD:279410 52/213 (24%)
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 93/235 (40%)
3a01204 67..665 CDD:273361 178/617 (29%)
ABC2_membrane 395..600 CDD:279410 52/213 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 1 1.000 - - mtm14984
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR48041
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
76.920

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