Sequence 1: | NP_001260309.1 | Gene: | CG5853 / 34322 | FlyBaseID: | FBgn0032167 | Length: | 689 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001101191.1 | Gene: | Abca4 / 310836 | RGDID: | 1309445 | Length: | 2290 | Species: | Rattus norvegicus |
Alignment Length: | 705 | Identity: | 160/705 - (22%) |
---|---|---|---|
Similarity: | 260/705 - (36%) | Gaps: | 206/705 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 55 TPPPIPTPPQVNYTNGNE----------PSKQPPLEPVVEEEVHFDTDALNNLPAREPVDMEFKE 109
Fly 110 LSLTVKLGFNRGSKEILHNVCGKFPGSQLIAIMGPSGAGKSTLLDALSGFKTTGVDGSILLNGR- 173
Fly 174 -RRDLPSFRRMSCYITQDDRLQPLLTVNENMHIAADLKLGQTVSYEEKESRIEDILLLLGLYNHD 237
Fly 238 QTLTMRLSGGQKKRLSIAMELINNPTVMFLDEPTTGLDSSSCTKVLELLKKLTSQGRTII-CTIH 301
Fly 302 QPTAKLFQIFDQVYVLSAG------------NCVYQGSTQKLVPFLQSV-------DLPCPMYHN 347
Fly 348 PADYIIELACGEYGYD-----KVDTL----------KLATENGSCLTWFHNPSAVLRAEVLMRK- 396
Fly 397 -YPIPKK--------TKSRSLEDT------SYSNQCSVLLRRGFIKAKRDTTMTHLRIGVNIAVA 446
Fly 447 ALFGAMY--DHTG---------------------------------------------REGSR-V 463
Fly 464 LDNYNLLFAILMHHSMTTMMLTVLTFPMDISILIKEHFNRWYSLKAYYTAMTLVDLPISIISCFF 528
Fly 529 -----FTVIVYLWSYQPMEWIRFFMFFSISLLTVFVGHSFGLMIGAWFDVVNGTFLAPVLTIPMM 588
Fly 589 MFAGFG-VTLRD--LPSYLRWGSHISYLRYGLEGFISAIYGLDRGTLACEEAPYC 640 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG5853 | NP_001260309.1 | 3a01204 | 97..689 | CDD:273361 | 149/653 (23%) |
ABCG_EPDR | 102..326 | CDD:213180 | 76/238 (32%) | ||
ABC2_membrane | 420..623 | CDD:279410 | 44/258 (17%) | ||
Abca4 | NP_001101191.1 | rim_protein | 1..2249 | CDD:130324 | 160/705 (23%) |
ABC_subfamily_A | 907..1126 | CDD:213230 | 73/229 (32%) | ||
ABC_subfamily_A | 1915..2135 | CDD:213230 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |