DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5853 and Abcg3l3

DIOPT Version :9

Sequence 1:NP_001260309.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_001100675.1 Gene:Abcg3l3 / 305142 RGDID:1564709 Length:647 Species:Rattus norvegicus


Alignment Length:679 Identity:173/679 - (25%)
Similarity:311/679 - (45%) Gaps:92/679 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 SSVTPPPIPTPPQ----VNYTNGNEPSKQPPLEPVVEEEVHFDTDALNNLPAREPVDMEFKELSL 112
            ||..|..||...:    :..||.::|      |.:.||.|.    :.:|:..||           
  Rat     3 SSNDPTVIPMAERRYGDLPETNTSDP------ETLTEEAVL----SFHNISYRE----------- 46

  Fly   113 TVKLGFNRGSK----EILHNVCGKFPGSQLIAIMGPSGAGKSTLLDALSGFK-TTGVDGSILLNG 172
            ||:.||....:    |.|.::.| ..|..|.|||||....:|.|||.|:..: ..|:.|.||:||
  Rat    47 TVQSGFPLRQQTHVMERLSSISG-IMGPGLNAIMGPQDGSRSLLLDVLAARRDPCGLSGDILVNG 110

  Fly   173 RRRDLPSFRRMSCYITQDDRLQPLLTVNENMHIAADLKLGQTVSYEEKESRIEDILLLLGLYNHD 237
            :.:. .:|:..|.|:.|:|.:...:||.:|:..:|.|:|..|::..||..||.::|.||.|....
  Rat   111 KPQP-ANFKCTSGYVPQNDVIMHTVTVRDNLEFSAALRLPMTITRNEKRRRINEVLELLHLEKEQ 174

  Fly   238 QTLTMRLSGGQKKRLSIAMELINNPTVMFLDEPTTGLDSSSCTKVLELLKKLTSQGRTIICTIHQ 302
            .|...  |...:||.|||:||:....::|||:||||||..:.|.::.:|::::.:|||:|.:|:|
  Rat   175 NTKPR--SKELRKRTSIAVELVTEHPILFLDDPTTGLDLRTTTDIIAVLRRMSKKGRTVIFSINQ 237

  Fly   303 PTAKLFQIFDQVYVLSAGNCVYQGSTQKLVPFLQSVDLPCPMYHNPADYIIELACG------EYG 361
            |...:|:.||.:.::::|..::.|..|..:.:..|.......::||||:.:::..|      |.|
  Rat   238 PQYSIFRFFDSLTLVASGKLMFHGPAQDALEYFTSAGYQYESHNNPADFFLDVINGGLCDTEEDG 302

  Fly   362 Y------DKVDTLKLATE---NGSCLTWFHNPSAVLRAEVLMRKYPIPKKTKSRSLED---TSYS 414
            :      |..:.|...||   |....:..|:.:.....::|..:    |:.:..::|.   |.:.
  Rat   303 HEADEHEDLYERLHQVTEKLANMYAQSPLHSDTRAKLDQLLGEQ----KQDRRSAMETTFVTPFW 363

  Fly   415 NQCSVLLRRGFIKAKRDTTMTHLRIGVNIAVAALFGAMYDHTGREGSRVLDNY--------NLLF 471
            :|...:..|.|...|....:|.::..:.:.:|...|.::        |:|.|.        .|||
  Rat   364 HQFGWITLRSFKNFKGFPWVTVIQAIIAVILAVFVGTIF--------RLLQNVCTEVKARAGLLF 420

  Fly   472 AILMHHSMTTMMLTVLTFPMDISILIKEHFNRWYSLKAYYTAMTLVDL-PISIISCFFFTVIVYL 535
            .:.....:.::....| |.:|.:..:.||.:.:|.:.:|:....|.:| |..::....||:|.|.
  Rat   421 FLTGFECILSVSAGEL-FLLDRNHFLHEHTSGYYRVSSYFFGKLLAELIPRRLLPSMIFTLITYF 484

  Fly   536 WSYQPMEWIRFFMFFSISLLTVFVGHSFGLMIGAWFDVVN-GTFLAPVLTIPMMMFAGFGV-TLR 598
            .:........||:.....::......|..|.:||..:... .|.|..:..:.|:.|:|..: ::.
  Rat   485 IAGMKTGVKGFFVTIFTVMMLASSASSLSLSLGAGENTAALPTTLITIYFMFMLFFSGLSLFSIN 549

  Fly   599 DLPSYLRWGSHISYLRYGLEGFISAIYGLDRGTLAC-----EEAPYCHYRY----PKKFLEEITM 654
            .||. |.|..::|...|   ||.:.::....|...|     ||...|. .|    .::||:.:.:
  Rat   550 FLPQ-LSWIQYLSIPHY---GFRALLHNEFLGQNFCPEHNTEEVSRCQ-NYVICTGEEFLQNLDI 609

  Fly   655 RGDQ--FWNDVIALGVMILVFRFVSYVVL 681
            ....  ||.:.:||..::::...:|||.|
  Rat   610 DSSSWGFWENHLALTCIMIILLMISYVRL 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_001260309.1 3a01204 97..689 CDD:273361 160/630 (25%)
ABCG_EPDR 102..326 CDD:213180 76/228 (33%)
ABC2_membrane 420..623 CDD:279410 45/213 (21%)
Abcg3l3NP_001100675.1 3a01204 64..644 CDD:273361 153/597 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.710

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