Sequence 1: | NP_001260309.1 | Gene: | CG5853 / 34322 | FlyBaseID: | FBgn0032167 | Length: | 689 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_237242.6 | Gene: | Abca12 / 301482 | RGDID: | 1304586 | Length: | 2595 | Species: | Rattus norvegicus |
Alignment Length: | 760 | Identity: | 174/760 - (22%) |
---|---|---|---|
Similarity: | 284/760 - (37%) | Gaps: | 253/760 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 103 VDMEFKELSLTVKL-GFNR--GSKEILHNVCGKFPGSQLIAIMGPSGAGKSTLLDALSG-FKTTG 163
Fly 164 VDGSILLNGR--RRDLPSFRRMSCYITQDDRLQPLLTVNENMHIAADLKLGQTVS---YEEKESR 223
Fly 224 IEDILLLLGLYNHDQTLTMRLSGGQKKRLSIAMELINNPTVMFLDEPTTGLDSSSCTKVLELLKK 288
Fly 289 LTSQGRTIICTIHQPTAKLFQIFDQVYVLSAGNCVYQGSTQKLVPFLQSVDLPC---PMYHNPAD 350
Fly 351 YIIELACGEYGYDKVDTLKLATE---NGSC-------LTWFHNPSAVLRAEV---LMRKYPIPKK 402
Fly 403 TK--------SRSLE--------------DTSYSNQCSVLLRRGFIKAKRDT------TMTHL-- 437
Fly 438 -RIGVNIAVAA-----LFGAMYDHTGREG-----SRVLDNYNLL----FAILM---HHS------ 478
Fly 479 ------------MTTMMLTVL-----------------------------------------TFP 490
Fly 491 ---------MDISILIKEHFNRWYSLKAYYTAMTLVDLPISIISC------------------FF 528
Fly 529 FTVIVYLWSYQPMEWIRFFMFFSISLLTVFV-----GHSFGLMI--GAWFDV----VNGTFLAPV 582
Fly 583 LTIPMMMFAGFGVTLRDLPSYLRWGSHISYLRYGLEGFISAIYGLDRGTLACEEAPYCHYRYP-K 646
Fly 647 KFLEEITMRGDQFWNDVIALGVM----ILVFRFVSYVVLKAKIKS 687 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG5853 | NP_001260309.1 | 3a01204 | 97..689 | CDD:273361 | 174/760 (23%) |
ABCG_EPDR | 102..326 | CDD:213180 | 71/231 (31%) | ||
ABC2_membrane | 420..623 | CDD:279410 | 61/325 (19%) | ||
Abca12 | XP_237242.6 | ABC2_membrane_3 | <1006..1267 | CDD:289468 | |
NosY | <1108..1269 | CDD:224196 | |||
ZnuC | 1346..1570 | CDD:224046 | 75/256 (29%) | ||
ABC_subfamily_A | 1350..1565 | CDD:213230 | 72/247 (29%) | ||
ABC2_membrane_3 | <1913..2174 | CDD:289468 | 32/126 (25%) | ||
CcmA | 2253..2567 | CDD:224054 | |||
ABC_subfamily_A | 2254..2477 | CDD:213230 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |