DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5853 and Abcg3l1

DIOPT Version :9

Sequence 1:NP_001260309.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_001004076.2 Gene:Abcg3l1 / 289453 RGDID:1303294 Length:646 Species:Rattus norvegicus


Alignment Length:679 Identity:177/679 - (26%)
Similarity:308/679 - (45%) Gaps:116/679 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 SKQPPLEPVVEEEVHFDTDALNNLPAREPVDME---------FKELSL--TVKLGFNRGSK---- 123
            |..|.:.|::|..       ..:||.....|.|         |..:|.  ||:.||....:    
  Rat     4 SNDPIVIPMIERR-------QGDLPETNTSDPETLTKEAVLSFHNISYRETVQSGFPLRQQTRVM 61

  Fly   124 EILHNVCGKFPGSQLIAIMGPSGAGKSTLLDALSGFK-TTGVDGSILLNGRRRDLPSFRRMSCYI 187
            |.|.::.| ..|..|.|||||....:|.|||.|:..: ..|:.|.||:||:.|. .:|:..|.||
  Rat    62 ERLSSISG-IMGPGLNAIMGPQDGSRSLLLDVLAARRDPCGLSGDILINGKPRP-ANFKCTSGYI 124

  Fly   188 TQDDRLQPLLTVNENMHIAADLKLGQTVSYEEKESRIEDILLLLGLYNHDQTLTMRLSGGQKKRL 252
            .|:|.:...:||.:|:..:|.|:|..||:.:||..||.::|.||.| ..:|.:..| |.|.:||.
  Rat   125 PQNDVVLGTVTVRDNLEFSAALRLPMTVTRDEKRRRINEVLELLHL-EKEQNVKPR-SKGLRKRT 187

  Fly   253 SIAMELINNPTVMFLDEPTTGLDSSSCTKVLELLKKLTSQGRTIICTIHQPTAKLFQIFDQVYVL 317
            ||||||:....::|||:||||||..:.|.|:.:|::::.:|:|||.:|:||...:|:.||.:.::
  Rat   188 SIAMELVTEHPILFLDDPTTGLDLRTTTDVISILRRMSMKGKTIIFSINQPQYSIFRFFDSLTLV 252

  Fly   318 SAGNCVYQGSTQKLVPFLQSVDLPCPMYHNPADYIIELACG------EYGYDKVDTLKLATENGS 376
            ::|..::.|..:..:.:..|.......::||||:.:::..|      |.|::       |.||..
  Rat   253 ASGKLMFHGPARDALEYFTSAGYQYESHNNPADFFLDVINGGFPDTEEDGHE-------ADENEE 310

  Fly   377 CLTWFHNPSAVL---------------RAEVLMRKYPIPKKTKSRSLEDTSYSNQCSVLLRRGFI 426
            .:...|..:..|               |.:.|:.:..:.:.:...:...|.:.:|...:.||.|.
  Rat   311 FVERQHQVTGKLANMYAQSPLHSATRARLDQLLGEQKLDRSSAVETTCVTPFWHQLGWITRRSFK 375

  Fly   427 KAKRDTTMTHLRIGVNIAVAALFGAMYDHTGREGSRVLDNYNLLFAILMHHSMTTMMLTVLT--- 488
            .......:|.:::.:.:.:|.:.|..:        |:|.|      :.....|..:::.:||   
  Rat   376 NFLGFPWVTTIQVIIIVILAVVVGTAF--------RLLQN------VCTELQMRAILILLLTGFQ 426

  Fly   489 ----------FPMDISILIKEHFNRWYSLKAYYTAMTLVDL-PISIISCFFFTVIVYLWSYQPME 542
                      |.:|....:.||.:.:|.:.:|:....|.:| |..::....||:|.|.     :.
  Rat   427 CITSVTAGELFVIDQDRFLHEHTSGYYRVSSYFFGKLLAELIPRRLLPSTIFTLITYF-----IA 486

  Fly   543 WIR------FFMFFSISLLTVFVGHSFGLMIGAWFDVVN-GTFLAPVLTIPMMMFAGFGVTLRDL 600
            .:|      |.|.|:|.:| .:...|..|.:||..:|.. .|.|..:..:.|:.|:|..:....|
  Rat   487 GLRTSVRGFFTMTFTIMML-AYSASSLSLSLGAGENVAAITTLLVTIYFVFMLFFSGLSLDTGFL 550

  Fly   601 PSYLRWGSHISYLRYGLEGFISAIYGLDRGTLAC-----EEAPYCHYRY----PKKFLE----EI 652
            | .|.|..:.|...|   ||.:.::....|...|     ||...|. .|    .::|||    .:
  Rat   551 P-VLSWIRYFSIPHY---GFRALLHNEFLGQNFCPEYNTEEVSRCQ-NYVICTGEEFLEIQGFHL 610

  Fly   653 TMRGDQFWNDVIALGVMILVFRFVSYVVL 681
            :..|  ||.:.:||...:::...::||.|
  Rat   611 SSWG--FWENHLALACTMIILLTITYVQL 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_001260309.1 3a01204 97..689 CDD:273361 173/656 (26%)
ABCG_EPDR 102..326 CDD:213180 87/239 (36%)
ABC2_membrane 420..623 CDD:279410 49/223 (22%)
Abcg3l1NP_001004076.2 P-loop_NTPase 35..261 CDD:304359 85/229 (37%)
3a01204 64..644 CDD:273361 162/612 (26%)
ABC2_membrane 369..572 CDD:279410 49/226 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.720

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