DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5853 and Abcg2

DIOPT Version :9

Sequence 1:NP_001260309.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_001342406.1 Gene:Abcg2 / 26357 MGIID:1347061 Length:657 Species:Mus musculus


Alignment Length:622 Identity:190/622 - (30%)
Similarity:309/622 - (49%) Gaps:53/622 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 MEFKELSLTVKL--GF---NRGSKEILHNVCGKF-PGSQLIAIMGPSGAGKSTLLDALSGFK-TT 162
            :.|..::..||:  ||   ....||||.::.|.. ||  |.||:||:|.|||:|||.|:..| ..
Mouse    37 LSFHHITYRVKVKSGFLVRKTVEKEILSDINGIMKPG--LNAILGPTGGGKSSLLDVLAARKDPK 99

  Fly   163 GVDGSILLNGRRRDLPS-FRRMSCYITQDDRLQPLLTVNENMHIAADLKLGQTVSYEEKESRIED 226
            |:.|.:|:||..:  |: |:..|.|:.|||.:...|||.||:..:|.|:|..|:...||..||..
Mouse   100 GLSGDVLINGAPQ--PAHFKCCSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMKNHEKNERINT 162

  Fly   227 ILLLLGLY----NHDQTLTMR-LSGGQKKRLSIAMELINNPTVMFLDEPTTGLDSSSCTKVLELL 286
            |:..|||.    :...|..:| :|||::||.||.||||.:|:::||||||||||||:...||.||
Mouse   163 IIKELGLEKVADSKVGTQFIRGISGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLL 227

  Fly   287 KKLTSQGRTIICTIHQPTAKLFQIFDQVYVLSAGNCVYQGSTQKLVPFLQSVDLPCPMYHNPADY 351
            |:::.||||||.:||||...:|::||.:.:|::|..|:.|..||.:.:..|....|..|:||||:
Mouse   228 KRMSKQGRTIIFSIHQPRYSIFKLFDSLTLLASGKLVFHGPAQKALEYFASAGYHCEPYNNPADF 292

  Fly   352 IIELACGE-----YGYDKVDTLKLATENGS--------CLTWFHNPSAV---LRAEVLMRKYPIP 400
            .:::..|:     ...::.|.....||..|        .|:.|:..||:   .:||:........
Mouse   293 FLDVINGDSSAVMLNREEQDNEANKTEEPSKGEKPVIENLSEFYINSAIYGETKAELDQLPGAQE 357

  Fly   401 KKTKSRSLED---TSYSNQCSVLLRRGFIKAKRDTTMTHLRIGVNIAVAALFGAMYDHTGREGSR 462
            ||..|...|.   ||:.:|...:.||.|.....:...:..::.|.:.:..:.||:|.....:.:.
Mouse   358 KKGTSAFKEPVYVTSFCHQLRWIARRSFKNLLGNPQASVAQLIVTVILGLIIGAIYFDLKYDAAG 422

  Fly   463 VLDNYNLLFAILMHHSMTTMMLTVLTFPMDISILIKEHFNRWYSLKAYYTAMTLVD-LPISIISC 526
            :.:...:||.:..:...:::....| |.::..:.|.|:.:.:|.:.:|:....:.| ||:..:..
Mouse   423 MQNRAGVLFFLTTNQCFSSVSAVEL-FVVEKKLFIHEYISGYYRVSSYFFGKVMSDLLPMRFLPS 486

  Fly   527 FFFTVIVYLWSYQPMEWIRFFMFFSISLLTVFVGHSFGLMIGAWFDVVN-GTFLAPVLTIPMMMF 590
            ..||.|:|...........||:.....::..:...|..|.|.....||: .|.|..:..:.||:|
Mouse   487 VIFTCILYFMLGLKKTVDAFFIMMFTLIMVAYTASSMALAIATGQSVVSVATLLMTIAFVFMMLF 551

  Fly   591 AGFGVTLRDLPSYLRWGSHISYLRYGLEGFISAIYGLDRGTLAC-----EEAPYCHYRYP----K 646
            :|..|.||.:..:|.|..:.|..||   ||.:..|....|...|     .:...|...|.    .
Mouse   552 SGLLVNLRTIGPWLSWLQYFSIPRY---GFTALQYNEFLGQEFCPGFNVTDNSTCVNSYAICTGN 613

  Fly   647 KFL--EEITMRGDQFWNDVIALGVMILVFRFVSYVVL 681
            ::|  :.|.:.....|.:.:||..||::|..::|:.|
Mouse   614 EYLINQGIELSPWGLWKNHVALACMIIIFLTIAYLKL 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_001260309.1 3a01204 97..689 CDD:273361 190/622 (31%)
ABCG_EPDR 102..326 CDD:213180 102/233 (44%)
ABC2_membrane 420..623 CDD:279410 45/204 (22%)
Abcg2NP_001342406.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
3a01204 46..651 CDD:273361 189/613 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R138
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.750

Return to query results.
Submit another query.