DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5853 and Abcg4

DIOPT Version :9

Sequence 1:NP_001260309.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_620405.3 Gene:Abcg4 / 192663 MGIID:1890594 Length:646 Species:Mus musculus


Alignment Length:638 Identity:275/638 - (43%)
Similarity:402/638 - (63%) Gaps:26/638 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 VNYTNGNEPSKQPPLEPVVEEEVHFDTDA--LNNLPAREPVDMEFKELSLTVKLG---FNRGSKE 124
            |...:|.||   |.|...:::..:..|:|  .::||.|..||:||.|||.:|:.|   ..||.|.
Mouse    22 VTLEDGAEP---PVLTTHLKKVENHITEAQRFSHLPKRSAVDIEFVELSYSVREGPCWRKRGYKT 83

  Fly   125 ILHNVCGKFPGSQLIAIMGPSGAGKSTLLDALSGFKTTGVDGSILLNGRRRDLPSFRRMSCYITQ 189
            :|..:.|||...:||.|||||||||||.::.|:|::.:|:.|.||:|||.|:|.:||:|||||.|
Mouse    84 LLKCLSGKFCRRELIGIMGPSGAGKSTFMNILAGYRESGMKGQILVNGRPRELRTFRKMSCYIMQ 148

  Fly   190 DDRLQPLLTVNENMHIAADLKLGQTVSYEEKESRIEDILLLLGLYNHDQTLTMRLSGGQKKRLSI 254
            ||.|.|.|||.|.|.::|:|||.:  ..|.|:..:.:||..|||.:...|.|..|||||:|||:|
Mouse   149 DDMLLPHLTVLEAMMVSANLKLSE--KQEVKKELVTEILTALGLMSCSHTRTALLSGGQRKRLAI 211

  Fly   255 AMELINNPTVMFLDEPTTGLDSSSCTKVLELLKKLTSQGRTIICTIHQPTAKLFQIFDQVYVLSA 319
            |:||:|||.|||.||||:||||:||.:|:.|:|.|...|||:|||||||:||||::||::|:||.
Mouse   212 ALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKSLAHGGRTVICTIHQPSAKLFEMFDKLYILSQ 276

  Fly   320 GNCVYQGSTQKLVPFLQSVDLPCPMYHNPADYIIELACGEYGYDKVDTLKLATENGSCLTWFHNP 384
            |.|:::|....|:|:|:.:.|.||.||||||:|||:|.|||| |....|..|.:||.| |.....
Mouse   277 GQCIFKGVVTNLIPYLKGLGLHCPTYHNPADFIIEVASGEYG-DLNPMLFRAVQNGLC-TMAEKK 339

  Fly   385 SAVLRAEVLMRKYPIPKKTKSRSLED-------TSYSNQCSVLLRRGFIKAKRDTTMTHLRIGVN 442
            |:..:.|:     |....|....|:.       ||...|..:|.||.|:...|||.:||||...:
Mouse   340 SSPGKNEL-----PAHCPTCPPELDPIESHTFATSTLTQFCILFRRTFLSILRDTVLTHLRFMSH 399

  Fly   443 IAVAALFGAMYDHTGREGSRVLDNYNLLFAILMHHSMTTMMLTVLTFPMDISILIKEHFNRWYSL 507
            :.:..|.|.:|.|.|.:.|:|.:|...||..::......:|.||||||:::::.::||.|.||:|
Mouse   400 VLIGVLIGLLYLHIGDDASKVFNNTGFLFFSMLFLMFAALMPTVLTFPLEMAVFMREHLNYWYTL 464

  Fly   508 KAYYTAMTLVDLPISIISCFFFTVIVYLWSYQPMEWIRFFMFFSISLLTVFVGHSFGLMIGAWFD 572
            ||||.|.|:.|:|..::....:..|||..:.||.|..||.:|.::::.|..|..|.||:|||...
Mouse   465 KAYYLAKTMADVPFQVVCPVVYCSIVYWMTGQPAETSRFLLFSALAIATALVAQSLGLLIGAAST 529

  Fly   573 VVN-GTFLAPVLTIPMMMFAGFGVTLRDLPSYLRWGSHISYLRYGLEGFISAIYGLDRGTLACEE 636
            .:. .||:.||..||:::|:||.|:.:.:|:||:|.|::||:|||.||.|..|||::||.|.|.:
Mouse   530 SLQVATFVGPVTAIPVLLFSGFFVSFKTIPTYLQWSSYLSYVRYGFEGLILTIYGMERGHLTCLD 594

  Fly   637 APYCHYRYPKKFLEEITMRGDQFWNDVIALGVMILVFRFVSYVVLKAKIKSIR 689
             ..|.:|.|:..|.|:.:...:.:.|.:.||:..|..|.::|:||:.::||.|
Mouse   595 -EQCPFRDPQIILRELDVEEAKLYMDFLVLGIFFLALRLLAYLVLRYRVKSER 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_001260309.1 3a01204 97..689 CDD:273361 266/602 (44%)
ABCG_EPDR 102..326 CDD:213180 123/226 (54%)
ABC2_membrane 420..623 CDD:279410 82/203 (40%)
Abcg4NP_620405.3 3a01204 44..646 CDD:273361 268/611 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 54 1.000 Domainoid score I11160
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 1 1.000 - - otm44012
orthoMCL 1 0.900 - - OOG6_100076
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R138
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.800

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