DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5853 and wht-8

DIOPT Version :9

Sequence 1:NP_001260309.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_499442.2 Gene:wht-8 / 189976 WormBaseID:WBGene00012925 Length:619 Species:Caenorhabditis elegans


Alignment Length:653 Identity:176/653 - (26%)
Similarity:294/653 - (45%) Gaps:120/653 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 DTDALNNLPAREP---VDMEFKELSLTVKLGFNRGSKEILHNVCGKFPGSQLIAIMGPSGAGKST 151
            ||:. |::..||.   |.::::.|.:|.|.|     :.:|:.|.|.....::||:||.|||||:|
 Worm    17 DTEN-NDIGVREQDNLVTLQWRNLKVTTKAG-----RVLLNGVSGCAVPGEVIALMGASGAGKTT 75

  Fly   152 LLDALSGFKTTG--VDGSILLNGRR--RDLPSFRRMSCYITQDDRLQPLLTVNENMHIAADLKLG 212
            ||:.|......|  |:|.||:||:.  :.:.|   :|.|:.|:|.....|||.|::.|.|.|:|.
 Worm    76 LLNTLLQRNLRGLQVEGEILVNGQNIGKGVTS---VSAYVQQEDLFMGTLTVKEHLDIQAKLRLP 137

  Fly   213 QTVSYEEKESRIEDIL--LLLGLYNHDQT----LTMRLSGGQKKRLSIAMELINNPTVMFLDEPT 271
            ...|...:.:|:.:::  :||......:.    :...:|||:.|||:.|.|:||||.::|.||||
 Worm   138 PGTSTTARATRVNEVMNEMLLEKPRDSRIGVPGIKKGISGGEMKRLAFATEMINNPPIIFCDEPT 202

  Fly   272 TGLDSSSCTKVLELLKKLT-SQGRTIICTIHQPTAKLFQIFDQVYVLSAGNCVYQGSTQKLVPFL 335
            |||||....:|::.|:::. .:|:|||||||||::::|:|||:|..|:.|...:.|:..:.:...
 Worm   203 TGLDSHMSLQVVKTLEQMALEKGKTIICTIHQPSSEVFEIFDKVVFLAQGRIAFHGAIDEAIHHF 267

  Fly   336 QSVDLPCPMYHNPADYIIELACGEYGYDKVDTLKL-ATENGSCLTWFHNPSAVLRAEVLMRKY-- 397
            .|.....|.:.|||||.|            |||.: .:|..:|.:         |.:.|..|:  
 Worm   268 SSCGYQVPDHTNPADYFI------------DTLAIKPSEAEACKS---------RCQELCDKFEK 311

  Fly   398 --------PIPKKTKSRSLEDTSYSNQCSVLLRRGFIKAKRDTTMTHL--------RIGVNIAVA 446
                    .:..:||........:|....|||...|.:...|......        ::.:.:.:.
 Worm   312 SFYNERLTKLMDQTKDVRAMTPHHSATYPVLLYALFYRYMLDNIRNPAIMKAKLIQKLFMGLFIG 376

  Fly   447 ALFGAMYDHTGREGSRVLDNY-NLLFAILMHHSMTTMMLTVLTFPMDISILIKEHFNRWYSLKAY 510
            .||..:  .|.::|   |.:| ..||..:...:.:|:.......|.|...|::|:.:|.|.:.||
 Worm   377 TLFYGL--ETDQDG---LASYKGALFYYISELTYSTIFGIQAFMPADYPPLVREYDDRIYPISAY 436

  Fly   511 YTAMTLVDLPISIISCFFFTV---IVYLWSYQPMEWIRFFMFFSISLLTVFVGHSFGLMIGAWFD 572
            |.|.....|||       |||   |:.:.||       |.:.|. |...||:...|..|...|..
 Worm   437 YIAKICSFLPI-------FTVDGIILVVSSY-------FLVGFP-SDFGVFLRQIFTCMAIEWNV 486

  Fly   573 VVNG--------------TFLAPVLTIPMMMFAGFGVTLRDLPSYLRWGSHISYLRYGLEGFISA 623
            ...|              |...|:||: ..:..|....:.::|:::.|..::|:.|||.|..:..
 Worm   487 AALGIAVCATAPSYAIAVTVTGPLLTV-FSLTGGLFTNIAEMPAWINWVQYLSWFRYGYESLVVN 550

  Fly   624 IYGLDR-GTLACE---EAPYCHYRYPKKFLEEITMRGDQF--------WNDVIALGVMILVFRFV 676
            .:..|: ..:.|.   ....|....|      |.::...|        |..:|.|.::|.:..::
 Worm   551 QFQHDQFANITCNANMNEQLCEKSGP------IAIKNFSFDTANLYTNWVAMIYLTIIIYIVGYM 609

  Fly   677 SYV 679
            ..|
 Worm   610 GLV 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_001260309.1 3a01204 97..689 CDD:273361 173/646 (27%)
ABCG_EPDR 102..326 CDD:213180 86/237 (36%)
ABC2_membrane 420..623 CDD:279410 53/228 (23%)
wht-8NP_499442.2 3a01204 22..615 CDD:273361 173/647 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R138
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.750

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