DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5853 and wht-6

DIOPT Version :9

Sequence 1:NP_001260309.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_498425.2 Gene:wht-6 / 188911 WormBaseID:WBGene00007060 Length:613 Species:Caenorhabditis elegans


Alignment Length:621 Identity:155/621 - (24%)
Similarity:275/621 - (44%) Gaps:71/621 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 PVDMEFKELSLTVKLGFNRGSKEILHNVCGKFPGSQLIAIMGPSGAGKSTLLDAL--SGFKTTGV 164
            ||.:.:..:::|.    .:..:.:|.||.|.....:|:|:||.|||||:|||:.|  ...|....
 Worm    31 PVSLHWNNITVTT----IKEKRLLLKNVSGYAKSGELLALMGASGAGKTTLLNMLMCRNLKGLST 91

  Fly   165 DGSILLNGRRRDLPSFRRMSCYITQDDRLQPLLTVNENMHIAADLKLGQTVSYEEKESRIEDILL 229
            :|:|.:||... ......:|.:..|::.....|||.|.:.|.|.|::..  |.:.:|.|:.|:|.
 Worm    92 EGTITVNGNEM-AHKISSISGFAQQEELFVGTLTVKEYLMIQAKLRING--SKKLREDRVTDVLH 153

  Fly   230 LLGLYN-HDQTLTM-----RLSGGQKKRLSIAMELINNPTVMFLDEPTTGLDSSSCTKVLELLKK 288
            .|.|:. .|..:.:     .:|||:.:||:.|.|:::||:::|.|||||||||.....|:::||.
 Worm   154 QLKLWKCRDSKIGVIGEKKGISGGEARRLTFACEMLSNPSLLFADEPTTGLDSFMAESVIQILKG 218

  Fly   289 LTSQGRTIICTIHQPTAKLFQIFDQVYVLSAGNCVYQGSTQKLVPFLQSVDLPCPMYHNPADYII 353
            :...|||||||||||:::|:|:|.:|..|:.|:..:||:.|:.:.|.:......|..:||:::||
 Worm   219 IAKTGRTIICTIHQPSSQLYQMFHRVIYLANGSTAFQGTPQESISFFEKCGHRVPDEYNPSEWII 283

  Fly   354 ELACGEYGY-----DKVDTLKLATENGSCLTWFHNPSAVLRAEVLMRKYPIPKKTKSRSLEDTSY 413
            .....:.|.     |::..:....|:..     |....:.:...:..|.|.|:      :...:.
 Worm   284 YKLAVQPGQEKQSNDRIQKIVEQYEDSD-----HQKRVMEQLSDVSEKIPPPE------MHRANV 337

  Fly   414 SNQCSVLLRRGFIKAKRDTTMTHLRIGVNIAVAALFGAMYDHTGREGSRVLDNYN-LLFAILMHH 477
            ..|...|..|..|...|...:|..::...|......|.:|..|..: :|.:.|.| .||.:...:
 Worm   338 FTQIFALSTRCGIDVWRAPQLTLAKVIQKILFGLFIGLLYLRTPYD-ARGIHNINGALFFLAGEY 401

  Fly   478 SMTTMMLTVLTFPMDISILIKEHFNRWYSLKAYYTAMTLVDLPISIISCFFFTVIVYLWSYQPME 542
            ..:|....:.....:..::.:|:.:..|:|..||.|..:..:|:..........|||        
 Worm   402 IYSTAYAIMFFLNNEFPLVAREYHDGLYNLWTYYFARCISLIPLFSTDGLILLFIVY-------- 458

  Fly   543 WI-----RFFMFFSISLLTVFVGH---SFGLMIGAWFDVVNGTFLAPVLTIPMMMFAGFG---VT 596
            |:     ........|::||....   :||:.:...|.....|  |.:.:.|:::|..||   ..
 Worm   459 WLIGLNTSVMQVIVASIITVLASQAASAFGIAMSCIFPTAQMT--AVMASPPLVLFRLFGGLYGN 521

  Fly   597 LRDLPSYLRWGSHISYLRYGLEGFISAIYGLDRGTLACEEAPYCHYRYPKKFLEEITMRGDQFWN 661
            ....|:.:||...||..|:..||.:...:         .|....|......:....|.....::.
 Worm   522 TNTFPAAIRWLQWISMYRFAFEGLVVNQW---------SEIDDFHSNAKNNWTNSTTNDVLDYFA 577

  Fly   662 --------DVIALGVMILVFRFVSYVVLKAKIKSIR 689
                    |:|.|.::.|.|..:.::.|..::|..|
 Worm   578 FSESAIPLDIIGLILISLAFYLIGFIALVHRMKKAR 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_001260309.1 3a01204 97..689 CDD:273361 154/619 (25%)
ABCG_EPDR 102..326 CDD:213180 81/231 (35%)
ABC2_membrane 420..623 CDD:279410 46/214 (21%)
wht-6NP_498425.2 P-loop_NTPase <3..>81 CDD:393306 19/53 (36%)
3a01204 50..613 CDD:273361 151/596 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R138
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.750

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