DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5853 and wht-2

DIOPT Version :9

Sequence 1:NP_001260309.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_502164.1 Gene:wht-2 / 178069 WormBaseID:WBGene00007513 Length:610 Species:Caenorhabditis elegans


Alignment Length:651 Identity:181/651 - (27%)
Similarity:301/651 - (46%) Gaps:118/651 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 LNNLPAREPVDMEFKELSLTVKLGFNRGSKEILHNVCGKFPGSQLIAIMGPSGAGKSTLLDALSG 158
            ::.|.|.:||.:.:..:|:..:    :..|:||.||.|.....||:|:||.|||||:|||:.|..
 Worm    23 ISALEAVDPVTLTWHNISIHAE----KSGKQILENVSGIAKPGQLLALMGASGAGKTTLLNMLLS 83

  Fly   159 FKTTGVD--GSILLNGRR--RDLPSFRRMSCYITQDDRLQPLLTVNENMHIAADLKL-GQTVSYE 218
            ....|::  ||:.:||..  |.:.:   :|.|..||:.....|||.|.:.|.|.|:: |.:   |
 Worm    84 RNLRGLETSGSVKVNGHELGRGITA---ISGYAQQDELFVGTLTVKEYLDIQAKLRVNGDS---E 142

  Fly   219 EKESRIEDILLLLGLYNHDQTL------TMRLSGGQKKRLSIAMELINNPTVMFLDEPTTGLDSS 277
            ::..|:.:::..||||....|.      ...:|||:.:||:.|.||::||:::|.|||||||||.
 Worm   143 KRRRRVGNVMSQLGLYKCQNTRIGTIGGQKGISGGEMRRLTFACELLSNPSILFCDEPTTGLDSF 207

  Fly   278 SCTKVLELLKKLTSQGRTIICTIHQPTAKLFQIFDQVYVLSAGNCVYQGSTQKLVPFLQSVDLPC 342
            ....|:::|..|...|||:|||||||:::|:.:||:|..::.|...:.||.:..:.|.:.....|
 Worm   208 MAESVVQVLSNLAKSGRTVICTIHQPSSQLYLMFDRVMFMAGGKTAFLGSPRDAIQFFEDAGFAC 272

  Fly   343 PMYHNPADYIIELACGEYGYDKVDTLK-LATENGSC-------LTWFHNPSAVLRAEVLMRKYPI 399
            |...||||.||.            ||. :..|...|       .|.|.|.|   ....|  |:.:
 Worm   273 PRNFNPADLIIH------------TLAVMPNEEDKCRQRIEVIYTKFQNSS---YGRTL--KFGV 320

  Fly   400 PKKTKSRSLED---TSYSNQCSVLLRRGFIKAKRDTTMTHLRIGVNIAVAALF-GAMYDHTGREG 460
            .|..:.:...:   |....|...||.|..|...|:.::|..:: :..::..|| |.:|..:....
 Worm   321 EKSDEGQRPSERHKTGILTQIGALLERSAIDTWRNPSLTRAKV-IQKSIMGLFIGLLYLQSPLTS 384

  Fly   461 SRVLDNYNLLFAILMHHSMTTMMLTVLTFPMDISILIKEHFNRWYSLKAYYTAMTLVDLPISIIS 525
            ..:.:....||.::...:.:|:...:...|.|..::.:|:.:..||:.:||.|..|..||:    
 Worm   385 IGISNLNGALFYLVCELTYSTIFGILNFLPADFPLVSREYHDGLYSVFSYYVARCLSYLPL---- 445

  Fly   526 CFFFT---VIVYLWSYQPMEWIRFFMFFSISLLTVFV-----------GHSFGLMIGAWFDVVNG 576
               ||   :|:.|.||    |:   :.||.|:..|..           ..:.|:||..       
 Worm   446 ---FTADGLIMLLVSY----WM---VGFSSSITQVLYACLIAFLIEQSSSACGIMISC------- 493

  Fly   577 TFLAPVLTI------PMM--------MFAGFGVTLRDLPSYLRWGSHISYLRYGLEGFI----SA 623
              ::|.|.|      ||:        ::|..|.    ||||:.|..::|:.|||.|.|.    |:
 Worm   494 --ISPSLPIAMSTAGPMLTLLSLTGGLYANVGA----LPSYISWIQYLSWFRYGFEAFAINQWSS 552

  Fly   624 IYGLDRGTLACEEAPYCHYRYPKKFLEEITMRGDQFWNDVIALGVMILVFRFVSYVVLKAKIKSI 688
            : .....|:..:|.       ....|.:::.|.:.|:.|:..:...||:|..:.|..|..::...
 Worm   553 V-NEQNTTIWTDEK-------RDSVLSQLSFRAEMFYPDLFIMSAFILIFYTIGYAGLALRVSKA 609

  Fly   689 R 689
            |
 Worm   610 R 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_001260309.1 3a01204 97..689 CDD:273361 180/646 (28%)
ABCG_EPDR 102..326 CDD:213180 86/234 (37%)
ABC2_membrane 420..623 CDD:279410 56/235 (24%)
wht-2NP_502164.1 3a01204 44..610 CDD:273361 175/628 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.720

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