DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5853 and wht-2

DIOPT Version :10

Sequence 1:NP_788019.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_502164.1 Gene:wht-2 / 178069 WormBaseID:WBGene00007513 Length:610 Species:Caenorhabditis elegans


Alignment Length:651 Identity:181/651 - (27%)
Similarity:301/651 - (46%) Gaps:118/651 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 LNNLPAREPVDMEFKELSLTVKLGFNRGSKEILHNVCGKFPGSQLIAIMGPSGAGKSTLLDALSG 158
            ::.|.|.:||.:.:..:|:..:    :..|:||.||.|.....||:|:||.|||||:|||:.|..
 Worm    23 ISALEAVDPVTLTWHNISIHAE----KSGKQILENVSGIAKPGQLLALMGASGAGKTTLLNMLLS 83

  Fly   159 FKTTGVD--GSILLNGRR--RDLPSFRRMSCYITQDDRLQPLLTVNENMHIAADLKL-GQTVSYE 218
            ....|::  ||:.:||..  |.:.:   :|.|..||:.....|||.|.:.|.|.|:: |.:   |
 Worm    84 RNLRGLETSGSVKVNGHELGRGITA---ISGYAQQDELFVGTLTVKEYLDIQAKLRVNGDS---E 142

  Fly   219 EKESRIEDILLLLGLYNHDQTL------TMRLSGGQKKRLSIAMELINNPTVMFLDEPTTGLDSS 277
            ::..|:.:::..||||....|.      ...:|||:.:||:.|.||::||:::|.|||||||||.
 Worm   143 KRRRRVGNVMSQLGLYKCQNTRIGTIGGQKGISGGEMRRLTFACELLSNPSILFCDEPTTGLDSF 207

  Fly   278 SCTKVLELLKKLTSQGRTIICTIHQPTAKLFQIFDQVYVLSAGNCVYQGSTQKLVPFLQSVDLPC 342
            ....|:::|..|...|||:|||||||:::|:.:||:|..::.|...:.||.:..:.|.:.....|
 Worm   208 MAESVVQVLSNLAKSGRTVICTIHQPSSQLYLMFDRVMFMAGGKTAFLGSPRDAIQFFEDAGFAC 272

  Fly   343 PMYHNPADYIIELACGEYGYDKVDTLK-LATENGSC-------LTWFHNPSAVLRAEVLMRKYPI 399
            |...||||.||.            ||. :..|...|       .|.|.|.|   ....|  |:.:
 Worm   273 PRNFNPADLIIH------------TLAVMPNEEDKCRQRIEVIYTKFQNSS---YGRTL--KFGV 320

  Fly   400 PKKTKSRSLED---TSYSNQCSVLLRRGFIKAKRDTTMTHLRIGVNIAVAALF-GAMYDHTGREG 460
            .|..:.:...:   |....|...||.|..|...|:.::|..:: :..::..|| |.:|..:....
 Worm   321 EKSDEGQRPSERHKTGILTQIGALLERSAIDTWRNPSLTRAKV-IQKSIMGLFIGLLYLQSPLTS 384

  Fly   461 SRVLDNYNLLFAILMHHSMTTMMLTVLTFPMDISILIKEHFNRWYSLKAYYTAMTLVDLPISIIS 525
            ..:.:....||.::...:.:|:...:...|.|..::.:|:.:..||:.:||.|..|..||:    
 Worm   385 IGISNLNGALFYLVCELTYSTIFGILNFLPADFPLVSREYHDGLYSVFSYYVARCLSYLPL---- 445

  Fly   526 CFFFT---VIVYLWSYQPMEWIRFFMFFSISLLTVFV-----------GHSFGLMIGAWFDVVNG 576
               ||   :|:.|.||    |:   :.||.|:..|..           ..:.|:||..       
 Worm   446 ---FTADGLIMLLVSY----WM---VGFSSSITQVLYACLIAFLIEQSSSACGIMISC------- 493

  Fly   577 TFLAPVLTI------PMM--------MFAGFGVTLRDLPSYLRWGSHISYLRYGLEGFI----SA 623
              ::|.|.|      ||:        ::|..|.    ||||:.|..::|:.|||.|.|.    |:
 Worm   494 --ISPSLPIAMSTAGPMLTLLSLTGGLYANVGA----LPSYISWIQYLSWFRYGFEAFAINQWSS 552

  Fly   624 IYGLDRGTLACEEAPYCHYRYPKKFLEEITMRGDQFWNDVIALGVMILVFRFVSYVVLKAKIKSI 688
            : .....|:..:|.       ....|.:::.|.:.|:.|:..:...||:|..:.|..|..::...
 Worm   553 V-NEQNTTIWTDEK-------RDSVLSQLSFRAEMFYPDLFIMSAFILIFYTIGYAGLALRVSKA 609

  Fly   689 R 689
            |
 Worm   610 R 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_788019.1 3a01204 97..689 CDD:273361 180/646 (28%)
wht-2NP_502164.1 3a01204 44..610 CDD:273361 175/628 (28%)

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