DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5853 and wht-1

DIOPT Version :9

Sequence 1:NP_001260309.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_001348731.1 Gene:wht-1 / 175859 WormBaseID:WBGene00015479 Length:671 Species:Caenorhabditis elegans


Alignment Length:649 Identity:183/649 - (28%)
Similarity:306/649 - (47%) Gaps:62/649 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 KQPPLEPVVEEEVHFDTDALN-NLPAREPVDMEFKELSLTVKLGFNRGSKEILHNVCGKFPGSQL 138
            :|..::|||.|..:....:|| ..|..:|.:...:..:...|    |..|||||||.|.....:|
 Worm    35 QQTGIQPVVPEGCNLYWSSLNVTGPETKPTNFVDRFRNNMPK----RRVKEILHNVSGMAESGKL 95

  Fly   139 IAIMGPSGAGKSTLLDALSGFKTTGVD--GSILLNGRRRDLPSFRRMSCYITQDDRLQPLLTVNE 201
            :||:|.|||||:||::.|:....|.:|  ||||::|||.:....|.||.::.|.|.....:|..|
 Worm    96 LAILGSSGAGKTTLMNVLTSRNLTNLDVQGSILIDGRRANKWKIREMSAFVQQHDMFVGTMTARE 160

  Fly   202 NMHIAADLKLG-QTVSYEEKESRIEDILLLLGLYNHDQTL------TMRLSGGQKKRLSIAMELI 259
            ::...|.|::| |..|..|::.|:|.:|..:||.....|:      ...||.|:|||||.|.|::
 Worm   161 HLQFMARLRMGDQYYSDHERQLRVEQVLTQMGLKKCADTVIGIPNQLKGLSCGEKKRLSFASEIL 225

  Fly   260 NNPTVMFLDEPTTGLDSSSCTKVLELLKKLTSQGRTIICTIHQPTAKLFQIFDQVYVLSAGNCVY 324
            ..|.::|.||||:|||:.....|::.|:.|...|.|:|.|||||::.::.:|:.|.:::.|..:|
 Worm   226 TCPKILFCDEPTSGLDAFMAGHVVQALRSLADNGMTVIITIHQPSSHVYSLFNNVCLMACGRVIY 290

  Fly   325 QGSTQKLVPFLQSVDLPCPMYHNPADYIIELACGEYGYDKVDTLK---------LATENGSCLTW 380
            .|...:.||..:....|||.|:||||::|. .......|:..::|         |:|:.|..:..
 Worm   291 LGPGDQAVPLFEKCGYPCPAYYNPADHLIR-TLAVIDSDRATSMKTISKIRQGFLSTDLGQSVLA 354

  Fly   381 FHNPSAVLRAEVLMRKYPIPKKTKSRSLED--TSYSNQCSVLLRRGFIKAKRDTTMTHLRIGVNI 443
            ..|.:. |||...:......:|||:...:|  .|:..|...|..|.::...||..:..:|:...:
 Worm   355 IGNANK-LRAASFVTGSDTSEKTKTFFNQDYNASFWTQFLALFWRSWLTVIRDPNLLSVRLLQIL 418

  Fly   444 AVAALFGAMYDHTGREGSRVLDNYNLLFAILMHHSMTTMMLTVLTFPMDISILIKEHFNRWYSLK 508
            ..|.:.|.::..|....:.::....::|..:.:.:.......|.....::.|:::|:.|..|...
 Worm   419 ITAFITGIVFFQTPVTPATIISINGIMFNHIRNMNFMLQFPNVPVITAELPIVLRENANGVYRTS 483

  Fly   509 AYYTAMTLVDLPISIISCFFFTVIVYLWSYQPMEWI-----RFFMFFSISLLTVFVGH---SFGL 565
            ||:.|..:.:||..||....:..|||        |:     .|:.:...||:|:.:.:   |...
 Worm   484 AYFLAKNIAELPQYIILPILYNTIVY--------WMSGLYPNFWNYCFASLVTILITNVAISISY 540

  Fly   566 MIGAWF---DVVNGTFLAPVLTIPMMMFAGFGVTLRDLPSYLRWGSHISYLRYGLEGF------- 620
            .:...|   ||  ...:.|:..:|:|.|.||.:|...:|||.:|.|.:||.:||.|..       
 Worm   541 AVATIFANTDV--AMTILPIFVVPIMAFGGFFITFDAIPSYFKWLSSLSYFKYGYEALAINEWDS 603

  Fly   621 ---ISAIYGLDRGTLACEEAPYCHYRYPKKFLEEITMRGDQFWNDVIALGVMILVFRFVSYVVL 681
               |...:.......|.:..|    :...:.||.|.........|:..|..|.:..|.::||.|
 Worm   604 IKVIPECFNSSMTAFALDSCP----KNGHQVLESIDFSASHKIFDISILFGMFIGIRIIAYVAL 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_001260309.1 3a01204 97..689 CDD:273361 176/626 (28%)
ABCG_EPDR 102..326 CDD:213180 85/232 (37%)
ABC2_membrane 420..623 CDD:279410 51/223 (23%)
wht-1NP_001348731.1 3a01204 76..667 CDD:273361 174/608 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2712
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R138
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.700

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