DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5853 and wht-1

DIOPT Version :10

Sequence 1:NP_788019.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_001348731.1 Gene:wht-1 / 175859 WormBaseID:WBGene00015479 Length:671 Species:Caenorhabditis elegans


Alignment Length:649 Identity:183/649 - (28%)
Similarity:306/649 - (47%) Gaps:62/649 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 KQPPLEPVVEEEVHFDTDALN-NLPAREPVDMEFKELSLTVKLGFNRGSKEILHNVCGKFPGSQL 138
            :|..::|||.|..:....:|| ..|..:|.:...:..:...|    |..|||||||.|.....:|
 Worm    35 QQTGIQPVVPEGCNLYWSSLNVTGPETKPTNFVDRFRNNMPK----RRVKEILHNVSGMAESGKL 95

  Fly   139 IAIMGPSGAGKSTLLDALSGFKTTGVD--GSILLNGRRRDLPSFRRMSCYITQDDRLQPLLTVNE 201
            :||:|.|||||:||::.|:....|.:|  ||||::|||.:....|.||.::.|.|.....:|..|
 Worm    96 LAILGSSGAGKTTLMNVLTSRNLTNLDVQGSILIDGRRANKWKIREMSAFVQQHDMFVGTMTARE 160

  Fly   202 NMHIAADLKLG-QTVSYEEKESRIEDILLLLGLYNHDQTL------TMRLSGGQKKRLSIAMELI 259
            ::...|.|::| |..|..|::.|:|.:|..:||.....|:      ...||.|:|||||.|.|::
 Worm   161 HLQFMARLRMGDQYYSDHERQLRVEQVLTQMGLKKCADTVIGIPNQLKGLSCGEKKRLSFASEIL 225

  Fly   260 NNPTVMFLDEPTTGLDSSSCTKVLELLKKLTSQGRTIICTIHQPTAKLFQIFDQVYVLSAGNCVY 324
            ..|.::|.||||:|||:.....|::.|:.|...|.|:|.|||||::.::.:|:.|.:::.|..:|
 Worm   226 TCPKILFCDEPTSGLDAFMAGHVVQALRSLADNGMTVIITIHQPSSHVYSLFNNVCLMACGRVIY 290

  Fly   325 QGSTQKLVPFLQSVDLPCPMYHNPADYIIELACGEYGYDKVDTLK---------LATENGSCLTW 380
            .|...:.||..:....|||.|:||||::|. .......|:..::|         |:|:.|..:..
 Worm   291 LGPGDQAVPLFEKCGYPCPAYYNPADHLIR-TLAVIDSDRATSMKTISKIRQGFLSTDLGQSVLA 354

  Fly   381 FHNPSAVLRAEVLMRKYPIPKKTKSRSLED--TSYSNQCSVLLRRGFIKAKRDTTMTHLRIGVNI 443
            ..|.:. |||...:......:|||:...:|  .|:..|...|..|.::...||..:..:|:...:
 Worm   355 IGNANK-LRAASFVTGSDTSEKTKTFFNQDYNASFWTQFLALFWRSWLTVIRDPNLLSVRLLQIL 418

  Fly   444 AVAALFGAMYDHTGREGSRVLDNYNLLFAILMHHSMTTMMLTVLTFPMDISILIKEHFNRWYSLK 508
            ..|.:.|.::..|....:.::....::|..:.:.:.......|.....::.|:::|:.|..|...
 Worm   419 ITAFITGIVFFQTPVTPATIISINGIMFNHIRNMNFMLQFPNVPVITAELPIVLRENANGVYRTS 483

  Fly   509 AYYTAMTLVDLPISIISCFFFTVIVYLWSYQPMEWI-----RFFMFFSISLLTVFVGH---SFGL 565
            ||:.|..:.:||..||....:..|||        |:     .|:.:...||:|:.:.:   |...
 Worm   484 AYFLAKNIAELPQYIILPILYNTIVY--------WMSGLYPNFWNYCFASLVTILITNVAISISY 540

  Fly   566 MIGAWF---DVVNGTFLAPVLTIPMMMFAGFGVTLRDLPSYLRWGSHISYLRYGLEGF------- 620
            .:...|   ||  ...:.|:..:|:|.|.||.:|...:|||.:|.|.:||.:||.|..       
 Worm   541 AVATIFANTDV--AMTILPIFVVPIMAFGGFFITFDAIPSYFKWLSSLSYFKYGYEALAINEWDS 603

  Fly   621 ---ISAIYGLDRGTLACEEAPYCHYRYPKKFLEEITMRGDQFWNDVIALGVMILVFRFVSYVVL 681
               |...:.......|.:..|    :...:.||.|.........|:..|..|.:..|.::||.|
 Worm   604 IKVIPECFNSSMTAFALDSCP----KNGHQVLESIDFSASHKIFDISILFGMFIGIRIIAYVAL 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_788019.1 3a01204 97..689 CDD:273361 176/626 (28%)
wht-1NP_001348731.1 3a01204 76..667 CDD:273361 174/608 (29%)

Return to query results.
Submit another query.