DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5853 and abch-1

DIOPT Version :9

Sequence 1:NP_001260309.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_495320.1 Gene:abch-1 / 174078 WormBaseID:WBGene00016973 Length:595 Species:Caenorhabditis elegans


Alignment Length:641 Identity:145/641 - (22%)
Similarity:247/641 - (38%) Gaps:133/641 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 MEFKELSLTVKLG----FNRGSK-----EILHNVCGKFPGSQLIAIMGPSGAGKSTLLDALSGFK 160
            :|.|.:|....:.    |::..|     :||.|:.......::.||:|.:.:||:|||:||    
 Worm     7 LECKSISFMTAISNGTWFSKIYKPPSVFQILKNISFTATSGEIHAIVGVADSGKTTLLEAL---- 67

  Fly   161 TTGVDGSI---------LLNGRRRDLPSFRRMSCYITQDDRLQPLLTVNENMHIAADLKLGQTVS 216
            |:|..|.|         :|..||     |.:...:|...::....|:|...::..|.|.|..|.:
 Worm    68 TSGAGGDIGGIAMLDKFMLTRRR-----FNKFCSHINYRNQYPSSLSVRSLLYYHARLCLSSTHT 127

  Fly   217 YEEKESRIEDILLLLGL--YNHDQTLTMRLSGGQKKRLSIAMELINNPTVMFLDEPTTGLDSSSC 279
            ..|.:.||.::..:..:  |.||:...:..|.  ::|:...|||:.:|.:..:|:||..|...|.
 Worm   128 SLEIDHRISELSAMFDVIGYAHDKLEDLSFSA--RRRVMTVMELLKDPILTIIDDPTAYLSPLSA 190

  Fly   280 TKVLELLKKLTSQ-GRTIICTIHQPTAKLFQIFDQVYVLSAGNCVYQGSTQKLVPFLQSVDLPCP 343
            .:::..|....:: .|.||.|:....:.|..:......|..|...|.|..:.|....:.....||
 Worm   191 YQLIYALHFYAAKFNRIIIITLRNVRSDLSHLLGSATCLFYGEVAYSGQMRLLPNHFKKAGFECP 255

  Fly   344 MYHNPADYIIELACGEYGYDKVDTLKL--ATENGSCLTWFH---------NPSAVLRAEVLM--- 394
            ...|||.|.:.|..    .||....|:  ..|..:.|..|.         :.|:.....||:   
 Worm   256 PNENPAAYYLSLLT----IDKESMQKVMETQEKATKLVAFRTDNDTSSDISGSSATGTGVLLDSG 316

  Fly   395 RKYPIPKKTKSRSLEDTSYSNQCSVLLRR--GFIKAKRDTTMTHLRIGVNIAVAALFGAMYDHTG 457
            ||.|             |.|...::|.||  ..|.:....::..| |...:..|.|  :....|.
 Worm   317 RKNP-------------SISTVAAILFRRVLSLIGSTPSNSLAGL-IAFPVTAAVL--SFLRPTS 365

  Fly   458 REGSRVLDNYNLLFAILMHHSMTTMMLTVLTFP--MDISILIKEHFNRWYSLKAYYTAMTLVDLP 520
            ...|  |..:.||..:.:      ::.|::.||  ...|:|.....|    |....|::|:..:.
 Worm   366 LPSS--LFFWKLLTFLYL------LLQTIVIFPNYSKTSLLSFRECN----LYCQTTSLTIFSIF 418

  Fly   521 ISIISCF---FFTVIVYLWSY--QPMEWIRFFMF----FSISLLTVFVGHSFGLMIGAWFDVVNG 576
            ..:.||.   .|..|| |||:  :.|..|...:|    ||.|:.|:...:           :.|.
 Worm   419 FLVYSCIQSSLFVGIV-LWSFKSEAMFQISLNLFLLSIFSFSIFTICARY-----------LKNC 471

  Fly   577 TFLAPVLTIPMMMF--AGFGV----TLRDLPSYLRWGSHISYLRYGLEGFISAIYGLDRGTLACE 635
            :.:..:.||.::.|  :|.||    |...:..|:...:..:|..:.|...:|:  .:|.     |
 Worm   472 SNIVILQTIIILAFFVSGNGVTGTTTSSSIQYYIGVINPFNYSNFLLSKLLSS--SIDN-----E 529

  Fly   636 EAPYCHYR-----------YPKKFLEEITMRGDQFWNDVIALGVMILVFRFVSYVV 680
            |..:..|.           ||..:..     .|.|.|..| |..:.|.|..:|:.:
 Worm   530 ECTFPSYMCKLSMNLHSDLYPPWYAP-----NDVFTNFAI-LFCLSLTFLVISFFI 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_001260309.1 3a01204 97..689 CDD:273361 145/641 (23%)
ABCG_EPDR 102..326 CDD:213180 59/241 (24%)
ABC2_membrane 420..623 CDD:279410 48/221 (22%)
abch-1NP_495320.1 P-loop_NTPase 18..238 CDD:393306 56/230 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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