DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5853 and Abcg5

DIOPT Version :9

Sequence 1:NP_001260309.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_446206.2 Gene:Abcg5 / 114628 RGDID:620298 Length:652 Species:Rattus norvegicus


Alignment Length:605 Identity:166/605 - (27%)
Similarity:289/605 - (47%) Gaps:68/605 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 KEILHNVCGKFPGSQLIAIMGPSGAGKSTLLDALSG-FKTTG-VDGSILLNG--RRRDLPSFRRM 183
            ::||.:|.......|.:.|:|.||:||:|||||:|| .:.|| ::|.:.:||  .|||  .|:..
  Rat    67 RKILKDVSLYIESGQTMCILGSSGSGKTTLLDAISGRLRRTGTLEGEVFVNGCELRRD--QFQDC 129

  Fly   184 SCYITQDDRLQPLLTVNENMHIAADLKLGQTVSYEEKESRIEDILL----------LLGLYNHDQ 238
            ..|:.|.|.....|||.|.:...|.|.| ::.|.:..:.::|.:|.          ::|.||.. 
  Rat   130 VSYLLQSDVFLSSLTVRETLRYTAMLAL-RSSSADFYDKKVEAVLTELSLSHVADQMIGNYNFG- 192

  Fly   239 TLTMRLSGGQKKRLSIAMELINNPTVMFLDEPTTGLDSSSCTKVLELLKKLTSQGRTIICTIHQP 303
                .:|.|:::|:|||.:|:.:|.||.|||||||||..:...::.||.:|..:.|.:|.|||||
  Rat   193 ----GISSGERRRVSIAAQLLQDPKVMMLDEPTTGLDCMTANHIVLLLVELARRNRIVIVTIHQP 253

  Fly   304 TAKLFQIFDQVYVLSAGNCVYQGSTQKLVPFLQSVDLPCPMYHNPADYIIELACGE--------Y 360
            .::||..||::.:|:.|..|:.|:.::::.|..:...|||.:.||.|:.::|...:        .
  Rat   254 RSELFHHFDKIAILTYGELVFCGTPEEMLGFFNNCGYPCPEHSNPFDFYMDLTSVDTQSREREIE 318

  Fly   361 GYDKVDTLKLA-TENGSCLTWFHNPSAVLRAEVLMRKYPIPKKTKSRSLEDTSYSNQCSVLLRRG 424
            .|.:|..|:.| .::..|.....|   :.|...|.....:|.|||:    ......:..|||||.
  Rat   319 TYKRVQMLESAFRQSDICHKILEN---IERTRHLKTLPMVPFKTKN----PPGMFCKLGVLLRRV 376

  Fly   425 FIKAKRDTTMTHLRIGVNIAVAALFGAMY----DHTGREGSRVLDNYNLLFAILMHHSMTTMMLT 485
            .....|:..:..:|:..|: :..||...|    .:...:|: |.|...||:.::.....|.|:..
  Rat   377 TRNLMRNKQVVIMRLVQNL-IMGLFLIFYLLRVQNNMLKGA-VQDRVGLLYQLVGATPYTGMLNA 439

  Fly   486 VLTFPMDISILIKEH----FNRWYSLKAYYTAMTLVDLPISIISCFFFTVIVYLWSYQPMEWIRF 546
            |..|||..::..:|.    :.:|..|.||    .|..||.||::...|:.:.| |:......:..
  Rat   440 VNLFPMLRAVSDQESQDGLYQKWQMLLAY----VLHALPFSIVATVIFSSVCY-WTLGLYPEVAR 499

  Fly   547 FMFFSISLLTV-FVGHSFGLMIGAWF---DVVNGTFLAPVLTIP-MMMFAGFGVTLRDLPSYLRW 606
            |.:||.:||.. .:|....|::....   ::||.  :..:|:|. :::.:||...:.::|..|:.
  Rat   500 FGYFSAALLAPHLIGEFLTLVLLGMVQNPNIVNS--IVALLSISGLLIGSGFIRNIEEMPIPLKI 562

  Fly   607 GSHISYLRYGLEGF-ISAIYGLD----RGTLACEEAPYCHYRYPKKFLEEITMRG--DQFWNDVI 664
            ..:.::.:|..|.. ::..|||:    ....:....|.|......:|:|: |..|  .:|..:.:
  Rat   563 LGYFTFQKYCCEILVVNEFYGLNFTCGGSNTSVPNNPMCSMTQGIQFIEK-TCPGATSRFTTNFL 626

  Fly   665 ALGVMILVFRFVSYVVLKAK 684
            .|...|.....:..||.|.:
  Rat   627 ILYSFIPTLVILGMVVFKVR 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_001260309.1 3a01204 97..689 CDD:273361 166/605 (27%)
ABCG_EPDR 102..326 CDD:213180 78/216 (36%)
ABC2_membrane 420..623 CDD:279410 51/216 (24%)
Abcg5NP_446206.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30
ABCG_White 50..276 CDD:213201 78/216 (36%)
3a01204 61..646 CDD:273361 166/603 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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