DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5853 and abcg1

DIOPT Version :9

Sequence 1:NP_001260309.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:XP_002942182.2 Gene:abcg1 / 100496811 XenbaseID:XB-GENE-996335 Length:664 Species:Xenopus tropicalis


Alignment Length:620 Identity:271/620 - (43%)
Similarity:381/620 - (61%) Gaps:36/620 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 DTDALNNLPAREPVDMEFKELSLTVKLG---FNRGSKEILHNVCGKFPGSQLIAIMGPSGAGKST 151
            :....::||.|..|::|||:||.::..|   ..:|.|.:|..:.|||...:|.||||||||||||
 Frog    61 EAQRFSSLPRRPAVNIEFKDLSFSIPEGPWWKKKGYKTLLKGISGKFHCGELAAIMGPSGAGKST 125

  Fly   152 LLDALSGFKTTGVDGSILLNGRRRDLPSFRRMSCYITQDDRLQPLLTVNENMHIAADLKLGQTVS 216
            |::.|:|::.||:.|.:|:||:.|||.|||::||||.|||.|.|.|||.|.|.::|.|||.:  .
 Frog   126 LMNILAGYRETGMKGEVLINGQPRDLRSFRKVSCYIMQDDMLLPHLTVQEAMMVSAHLKLQE--K 188

  Fly   217 YEEKESRIEDILLLLGLYNHDQTLTMRLSGGQKKRLSIAMELINNPTVMFLDEPTTGLDSSSCTK 281
            .|.::..:::||..|||.....|.|..|||||:|||:||:||:|||.|||.||||:|||||||.:
 Frog   189 DEGRKEMVKEILTALGLLPCADTRTGSLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSSSCFQ 253

  Fly   282 VLELLKKLTSQGRTIICTIHQPTAKLFQIFDQVYVLSAGNCVYQGSTQKLVPFLQSVDLPCPMYH 346
            |:.|:|.|...||.||||||||:||||::|||:||||.|.|:|:|....|||:|:.:.|.||.||
 Frog   254 VVSLMKSLAQGGRNIICTIHQPSAKLFELFDQLYVLSQGQCIYRGKVSNLVPYLRVLGLNCPTYH 318

  Fly   347 NPADYIIELACGEYGYDKVDTLKLATENGSC----------------LTWFHNPSAVLRAEVLMR 395
            ||||:|:|:|.|||| |:...|..|.::..|                |.| |.|.          
 Frog   319 NPADFIMEVASGEYG-DQNPHLVRAVQDNLCEVEPKRDLCGENEQSPLMW-HRPD---------- 371

  Fly   396 KYPIPKKTKSRSLEDTSYSNQCSVLLRRGFIKAKRDTTMTHLRIGVNIAVAALFGAMYDHTGREG 460
              ..|..|:.......|...|..:|.:|.||...||:.:|||||..:|.:..|.|.:|...|.|.
 Frog   372 --EDPSPTEGCHSFSASCLTQFCILFKRTFINIMRDSVLTHLRITSHIGIGILIGLLYLGIGNEA 434

  Fly   461 SRVLDNYNLLFAILMHHSMTTMMLTVLTFPMDISILIKEHFNRWYSLKAYYTAMTLVDLPISIIS 525
            .:||.|...||..::......:|.||||||:::.:.::||.|.||||||||.|.|:.|:|..|:.
 Frog   435 KKVLSNSGFLFFSMLFLMFAALMPTVLTFPLEMGVFLREHLNYWYSLKAYYLAKTMADVPFQIMF 499

  Fly   526 CFFFTVIVYLWSYQPMEWIRFFMFFSISLLTVFVGHSFGLMIGAWFDVVN-GTFLAPVLTIPMMM 589
            ...:..|||..:.||.:.:||.:|.::..:|..|..|.||:|||....:. .||:.||..||:::
 Frog   500 PVAYCSIVYWMTSQPSDALRFILFAALGTMTSLVAQSLGLLIGAASTSLQVATFVGPVTAIPVLL 564

  Fly   590 FAGFGVTLRDLPSYLRWGSHISYLRYGLEGFISAIYGLDRGTLACEEAPYCHYRYPKKFLEEITM 654
            |:||.|:...:||||:|.|::||:|||.||.|.:||||||..|.||:...||::..:..|:|:.:
 Frog   565 FSGFFVSFDTIPSYLQWMSYMSYVRYGFEGVILSIYGLDREDLHCEKDETCHFQKSEAILKELDV 629

  Fly   655 RGDQFWNDVIALGVMILVFRFVSYVVLKAKIKSIR 689
            ...:.:.|.|.|||..:..|..:|.|||.||::.|
 Frog   630 EDAKLYLDFIILGVFFVTLRLTAYFVLKYKIRAER 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_001260309.1 3a01204 97..689 CDD:273361 270/611 (44%)
ABCG_EPDR 102..326 CDD:213180 124/226 (55%)
ABC2_membrane 420..623 CDD:279410 85/203 (42%)
abcg1XP_002942182.2 3a01204 59..664 CDD:273361 270/618 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 1 1.000 - - otm49186
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.010

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