DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5853 and abca10

DIOPT Version :9

Sequence 1:NP_001260309.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:XP_031750511.1 Gene:abca10 / 100485734 XenbaseID:XB-GENE-6464279 Length:1610 Species:Xenopus tropicalis


Alignment Length:525 Identity:118/525 - (22%)
Similarity:206/525 - (39%) Gaps:110/525 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 SKQPPLEPVVEEEVHFDTDALNNLPAREPVDMEFKE---LSLTVKLGFNRG-SKEILHNVCGKFP 134
            ||:.| .|::.:.......:|.:...:.|.|:..||   :....|..:::. :.|.|.::.....
 Frog   441 SKEKP-SPLMAQTDDSGESSLGHFVEKVPADLHGKEAIRIHGVKKTYYDKDKNTEALRDLDLNIY 504

  Fly   135 GSQLIAIMGPSGAGKSTLLDALSGFKTTGVDGSILLN---GRRRDLPSFRRMSCYITQDD-RLQP 195
            ..|:.|::|.|||||:|||:.|||...|....:.:.|   ...|.|...::...:..|.| :..|
 Frog   505 EGQITALLGHSGAGKTTLLNILSGMCPTSGGSATVCNYKLSNMRHLGEIKKRVGFCPQGDIKFDP 569

  Fly   196 LLTVNENMHIAADLKLGQTVSYEEKESRIEDILLLLGLYNHDQTLTMRLSGGQKKRLSIAMELIN 260
             |||.||:.:.|.:|   .:..:|...:::.:|..|.:.:.:.....:||||||::|:..:.::.
 Frog   570 -LTVKENLTVFAMIK---GIPSKEVAHKVQTVLSDLQMNDIENIEASKLSGGQKRKLTFGIAILG 630

  Fly   261 NPTVMFLDEPTTGLDSSSCTKVLELLKKLTSQGRTIICTIHQPTAKLFQIFDQVYVLSAG--NCV 323
            :|.|:.|||||.|||..|...:..:||:..:...|::.|.....|.:  :.|:..|:|.|  .||
 Frog   631 DPQVLLLDEPTAGLDPCSRHNIWTILKESKADRVTLLSTQFMDEADI--LADRKVVISKGKLKCV 693

  Fly   324 YQGSTQKLVPFLQSVDLPCPMYHNPA------DYIIELACGEYGYDKVDTLKLATENGSCLTW-- 380
               .|...:.....|.....|..:|:      ..||:        ..:.:.||.|:|...||:  
 Frog   694 ---GTSLFLKRKWGVGYHLRMQVSPSCDVELMTSIIK--------QHIPSTKLTTQNEEELTYTL 747

  Fly   381 -FHN----PSAVL-----------------------------RAEVLMRKYPI--PKKTKSRSLE 409
             |.|    |...|                             ..|:....|.:  |:...:...|
 Frog   748 PFENMDVFPDLFLHLDGQVGNSIVNYGVSMTTLDDVFLKLEGEGEIESGDYDVFNPESRTNEDRE 812

  Fly   410 DTSYSNQCSVLLRRGFIKAKRDTTMTHLRIGVN--IAVAALFGAMYDHTGREGSRVLDNYNLLFA 472
            |.|...:.|:|.    :....:.|::...:...  :|||.:......|..:....:|        
 Frog   813 DFSTEMEESLLQ----MSDSGNVTLSGWELWRQQVLAVARIRLLKLRHDTKSFRSIL-------- 865

  Fly   473 ILMHHSMTTMMLTVLTFPMDISIL---IKEHFNRW------------YSLKAYYTAMTLVDLPIS 522
                     ::|.|:|.|..|.|:   |...|:.|            ..|..|||.:.:.:...|
 Frog   866 ---------LLLVVITLPPIIIIITSNIVNTFDAWELTPHLYFQSPRNRLNKYYTDLLICNNTGS 921

  Fly   523 IISCF 527
            .|..|
 Frog   922 SIEDF 926

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_001260309.1 3a01204 97..689 CDD:273361 113/502 (23%)
ABCG_EPDR 102..326 CDD:213180 67/233 (29%)
ABC2_membrane 420..623 CDD:279410 23/125 (18%)
abca10XP_031750511.1 rim_protein <107..1597 CDD:130324 118/525 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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