DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5853 and abcg5

DIOPT Version :9

Sequence 1:NP_001260309.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:XP_031757398.1 Gene:abcg5 / 100145776 XenbaseID:XB-GENE-963936 Length:662 Species:Xenopus tropicalis


Alignment Length:659 Identity:168/659 - (25%)
Similarity:292/659 - (44%) Gaps:113/659 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 QVNYTNGNEPSKQP-PLEPVVEEEVHFDTDALNNLP-AREPVDMEFKELSLTV--KLG------- 117
            |:|..:..:|.:|. ||:||..:.....|.:....| |.....:..:.:..||  ::|       
 Frog     6 QMNTMDQPQPERQSYPLQPVGPDNASVSTGSDAMAPSAGSNCTISVEGICYTVSERIGPWWDIQS 70

  Fly   118 -FNRGSKEILHNVCGKFPGSQLIAIMGPSGAGKSTLLDALS---GFKTTGVDGSILLNGRRRDLP 178
             :.:.:::||.:|.......|::||:|.||:||:|||||:|   |.|.| :.|.:.:||.:....
 Frog    71 YYKKWTRQILKDVSFFLESGQIMAILGNSGSGKTTLLDAMSGRIGHKGT-LLGEVYVNGSQLKKE 134

  Fly   179 SFRRMSCYITQDDRLQPLLTVNENMHIAADLKLGQTVSYEEKESRIEDILLLLGLYNHDQT---- 239
            .|:....|:.|.|.|...|||.|.:...|.|.| |..|.:..:.:::.::..|.|.....:    
 Frog   135 QFQNCFSYVLQHDTLLSYLTVRETLTYTALLAL-QKHSKQAIKEKVQSVMTELSLMQVANSVIGG 198

  Fly   240 -LTMRLSGGQKKRLSIAMELINNPTVMFLDEPTTGLDSSSCTKVLELLKKLTSQGRTIICTIHQP 303
             :...:|.|:::|:|||.:||.:|.::.||||||||||.:..:::.||.:|..:.|.:|.:||||
 Frog   199 RIFNGISSGERRRVSIAAQLIQDPKIILLDEPTTGLDSMTANQIVLLLSELARKDRIVIISIHQP 263

  Fly   304 TAKLFQIFDQVYVLSAGNCVYQGSTQKLVPFLQSVDLPCPMYHNPADYIIELACGEYGYDKVDTL 368
            .::||::||::.::|.|..::.|:..:::.|.......||.:.||.|:.::|.       .|||.
 Frog   264 RSELFRVFDKIAIMSLGELIFCGNPDEMISFFDGCGYECPQHSNPFDFYVDLT-------SVDTR 321

  Fly   369 KLATENGSCLTWFHNPSAVLRA-------EVLMRKYPIPKKTKSRSL------EDTSYSNQCSVL 420
            ....|    |..:....|:..|       :..:.|....|:.:...|      |..|..::..||
 Frog   322 SKERE----LETYSRSQAIASAYKNSDFYQNALEKIKTAKRNRKEKLIPFKRKEAPSELSKVYVL 382

  Fly   421 LRRGFIKAKRDTTMTHLRIGVNIAVAALFGAMYDHTGRE--GSRVLDNYNLLFAILMHHSMTTMM 483
            |||.|....||.....:|:..|:...........|...:  ...|.|....::..|.....|.::
 Frog   383 LRRTFRNLSRDKIGIVMRLSQNLIFGLFIAFFLIHLSNDILKGAVQDRLGFIYQCLGAPPYTGLL 447

  Fly   484 LTVLTFPMDISILIKEH----FNRWYSLKAYYTAMTLVDLPISIISCFFFTVIVYLWSYQPMEWI 544
            ..|..||...:|..:|.    :.:|..|.||...:    :|.||:|...|:..:|        |:
 Frog   448 NAVALFPTLRAIGDQEGKDGLYQKWQMLLAYIIHI----VPFSILSVVIFSGFIY--------WV 500

  Fly   545 --------RFFMFFSISLLTVFVGHSFG-LMIGAWFDVVN-------GTFLAPVLTIPMMMFAGF 593
                    ||.:||::    :.|.|..| |:..|...:||       |..|..:..|    ..|.
 Frog   501 IGLYPDILRFGIFFAV----ILVPHLMGELLTLAVLGIVNNPNIVNAGVSLLNIAGI----LIGS 557

  Fly   594 GV--TLRDLPSYLRWGSHISYLRYGLE--------------GFISAIYGLDRGTLACEEAPYCHY 642
            |:  :|:::|...:..|:|:|.:|..|              |..:|..|::         |.|.:
 Frog   558 GILRSLQEMPQVFQLLSYITYQKYASELLVINEFTDLNFTCGGANASVGVN---------PECPF 613

  Fly   643 RYPKKFLEE 651
            ....:|:|:
 Frog   614 TQGNEFIEQ 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_001260309.1 3a01204 97..689 CDD:273361 159/625 (25%)
ABCG_EPDR 102..326 CDD:213180 76/241 (32%)
ABC2_membrane 420..623 CDD:279410 54/240 (23%)
abcg5XP_031757398.1 ABCG_White 60..286 CDD:213201 74/227 (33%)
3a01204 63..662 CDD:273361 155/602 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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