DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42366 and Cdkl4

DIOPT Version :10

Sequence 1:NP_723501.2 Gene:CG42366 / 34319 FlyBaseID:FBgn0259712 Length:706 Species:Drosophila melanogaster
Sequence 2:NP_001419046.1 Gene:Cdkl4 / 503009 RGDID:1583704 Length:342 Species:Rattus norvegicus


Alignment Length:331 Identity:120/331 - (36%)
Similarity:176/331 - (53%) Gaps:23/331 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNRYITLTQLGDGTYGTVVLGQRKDTGEKVAIKRMKRKYYSWEE-----AMNLREVKSLKKLSHP 60
            |.:|..|.::|:|:||.|...:.|.:|:.||||    |:...|:     .:.|||::.||:|.||
  Rat     1 MEKYEKLAKIGEGSYGVVFKCRNKSSGQVVAIK----KFVESEDDPVVRKIALREIRMLKQLKHP 61

  Fly    61 NIVKLKEVIRENDTLYFVFEYMKENLYQMIKDRDTHLPEPELKSILFQVLTGLAFMHRHGFFHRD 125
            |:|.|.||.|....::.||||....|...::.....:.:..:||:|:|.|..|.|.|:|...|||
  Rat    62 NLVNLIEVFRRKRKMHLVFEYCDHTLLNELERNPNGVSDGVIKSVLWQTLQALNFCHKHNCIHRD 126

  Fly   126 LKPENLLCSGPDLIKIADFGLAREIRSRPPFTDYVSTRWYRAPEVLLHSTNYGSTIDLWAMGCIM 190
            :||||:|.:...:|||.|||.||.:.....:||||:||||||||:|:..|.|||::|:||:||:.
  Rat   127 VKPENILIAKQGVIKICDFGFARILIPGDAYTDYVATRWYRAPELLVGDTKYGSSVDIWAVGCVF 191

  Fly   191 AELYTFRPLFPGSSEVDQLFKICSVLG--TPDKDDWPDGYRLASMIHFRYPDCIKVPLSSVVSRC 253
            |||.|.:||:||.|:||||:.|...||  .|.........:....|....|:.::. |....|..
  Rat   192 AELLTGQPLWPGKSDVDQLYLIIRTLGKLIPRHQSIFKSNQFFRGISIPEPEDMET-LEEKFSNV 255

  Fly   254 SQNGLDLLEDMLAYDPDKRPTAQQSLKYPYFHALKRISPTAATKANVRLNSKYAASNGHPVQSVS 318
            ....|..::..|..|||:|.|..|.|...||.:.:...           ..:.|.|.|...:...
  Rat   256 QPMALSFMKGCLKMDPDERLTCAQLLDSTYFESFQEDQ-----------MKRKARSEGRSRRRQQ 309

  Fly   319 NNVLPV 324
            |.:||:
  Rat   310 NQLLPL 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42366NP_723501.2 STKc_MAK_like 4..284 CDD:270824 111/286 (39%)
Cdkl4NP_001419046.1 STKc_CDKL1_4 2..286 CDD:270837 111/288 (39%)

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