DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42366 and Srpk79D

DIOPT Version :9

Sequence 1:NP_723501.2 Gene:CG42366 / 34319 FlyBaseID:FBgn0259712 Length:706 Species:Drosophila melanogaster
Sequence 2:NP_001246881.1 Gene:Srpk79D / 40461 FlyBaseID:FBgn0025702 Length:1018 Species:Drosophila melanogaster


Alignment Length:749 Identity:145/749 - (19%)
Similarity:252/749 - (33%) Gaps:227/749 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NRYITLTQLGDGTYGTVVLGQRKDTGEKVAIKRMKRKYYSWEEAMNLREVKSLKKL--SHPNIVK 64
            ||:..:.:||.|.:.||.|.:.....:.||:|.:|...:..|.|.:  |::.|:.:  :.|..||
  Fly   345 NRFRVVRKLGWGHFSTVWLCRDLKDEKYVALKVVKSAPHYIETAAD--EIRLLEAIRDADPMDVK 407

  Fly    65 LKEVIR--ENDTL--------YFVFEYMKENLYQMI-KDRDTHLPEPELKSILFQVLTGLAFMH- 117
            .:.::|  .:.|:        ..|||.:..:||::| |:....|...::::|:.|||.||.::| 
  Fly   408 RERIVRLMNHFTVRGVNGMHTCLVFEALGCSLYKLIVKNNYQGLAIAQVRNIIRQVLEGLDYLHS 472

  Fly   118 RHGFFHRDLKPENLLCSGPDLIKIADFGLAREIRSRPPFTDYVSTRWYRAPEVLLHSTNYGSTID 182
            :....|.|:||||:|.                                    |:.::......||
  Fly   473 KCSIIHTDIKPENILL------------------------------------VIDNAAAMNQQID 501

  Fly   183 LWAMGCIMAELYTFRPLFPGSSEVDQLFKICSVLGTPDKDDWPDGYRLASMIHFRYPDCIKVPLS 247
                                 .|::.|    .|.|.    |:||.|                 :|
  Fly   502 ---------------------DEINSL----RVKGV----DFPDSY-----------------IS 520

  Fly   248 SVVSRCSQNGLDLLEDMLAYDPDKRPTAQQSLKYPYFHALKRISPTAATKANVRLNSKYAASNGH 312
            |:                     ::.|..:: |:|.      |.|..:|..|.. .|...|:|.:
  Fly   521 SI---------------------EKQTKSRA-KWPL------IEPNGSTNTNTN-TSNSTATNSN 556

  Fly   313 PVQSVSNNVLPVQEKLQAVTELLHQTNNNMNSHSNLGKNNNLAPK----------NGG------V 361
            ....::..::...:|....|    .|::.:||::    .::||.|          |||      :
  Fly   557 SSTPLAAVIMSTLDKEDTTT----TTSSTLNSNT----TSSLASKYSSLLGDSECNGGLGGSANI 613

  Fly   362 PRKYQPKLSFLTTSEMGAGSHADSSSLVGGATV--------DGVPVPQHQNGGESINDIYLNRNI 418
            ..:|:.:......|.......|:|.:|...:|:        |..|.|:..:...::.:       
  Fly   614 NNRYRTEKKITAKSSGDCDEDAESDTLGEQSTLASTMDSPTDLDPEPELDSKPNTVPE------- 671

  Fly   419 SQLFGLPA-GPQHQQQQQVHHPNVSFSTTSSRNAGAI---YVNGSHLSYDTANMNAKNNAKFVVG 479
                  |: ||..:|..    ||.:.|:..|.|...|   .:|.:.||  |.......|......
  Fly   672 ------PSEGPIPEQPT----PNSTNSSCPSHNTATIAKSKINSNILS--TCTSLTSTNEYCFTN 724

  Fly   480 ASNGGYYVPVARPSLLGPDAKVYNVFSKVSASQAPPSLIVRQ-PQLQPEVAPAPMRLSGRSRAAA 543
            .:......|.|.||.....|...       ||..|||..... .|:.|. |.||...:..:.:|.
  Fly   725 TNTTTASTPSAPPSATPSSAPAL-------ASATPPSTCTPSFTQIAPS-ATAPATSTTCTTSAE 781

  Fly   544 AVQ-DPKMGALKSDDLDLILGSKLKTSAKRQRN-AKANILLEDLFGQLSMDSDSDGKYPHTVPPT 606
            ... |.|..:..:......:.|...|:|..... ||.|:                  :.:.:|..
  Fly   782 FYDGDHKTTSTSTTTTSNAISSATTTTATTTTAIAKLNV------------------HANAIPSQ 828

  Fly   607 QQAKSGKTSTGGHGAGARERDLFGESYLPRPGLRKKATQSSLEVNNGSHADSLAPNAQKEKPAVA 671
            .|::|.:.:|           ...:|.:....:|.|.........:..|........|.....|.
  Fly   829 NQSQSSQNNT-----------YTIQSLIDNSNVRVKIADLGNACYDYHHFTEDIQTRQYRSIEVL 882

  Fly   672 SSFPWDESNRTEDEKLTAWMVAE--NGNLILDNH 703
            ...|:   |.|.|...||.:..|  .|:.:.|.|
  Fly   883 LGAPY---NYTADIWSTACLAFELATGDYLFDPH 913

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42366NP_723501.2 STKc_MAK_like 4..284 CDD:270824 57/293 (19%)
S_TKc 4..284 CDD:214567 57/293 (19%)
Srpk79DNP_001246881.1 STKc_SRPK 336..>504 CDD:271038 46/217 (21%)
S_TKc 347..>492 CDD:214567 42/182 (23%)
STKc_SRPK <844..1012 CDD:271038 15/73 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24055
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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