DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42366 and Cdk11b

DIOPT Version :10

Sequence 1:NP_723501.2 Gene:CG42366 / 34319 FlyBaseID:FBgn0259712 Length:706 Species:Drosophila melanogaster
Sequence 2:NP_665709.2 Gene:Cdk11b / 252879 RGDID:628604 Length:784 Species:Rattus norvegicus


Alignment Length:405 Identity:127/405 - (31%)
Similarity:193/405 - (47%) Gaps:75/405 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LTQLGDGTYGTVVLGQRKDTGEKVAIKRMK-RKYYSWEEAMNLREVKSLKKLSHPNIVKLKEVI- 69
            |.::.:||||.|...:.|.|.|.||:||:| .|........:|||:.::.|..|||||.::|:: 
  Rat   430 LNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINTILKAQHPNIVTVREIVV 494

  Fly    70 -RENDTLYFVFEYMKENLYQMIKDRDTHLPEPELKSILFQVLTGLAFMHRHGFFHRDLKPENLLC 133
             ...|.:|.|..|::.:|..:::.........|:|:::.|:|:|:..:|.:...|||||..|||.
  Rat   495 GSNMDKIYIVMNYVEHDLKSLMETMKQPFLPGEVKTLMIQLLSGVKHLHDNWILHRDLKTSNLLL 559

  Fly   134 SGPDLIKIADFGLAREIRS-RPPFTDYVSTRWYRAPEVLLHSTNYGSTIDLWAMGCIMAELYTFR 197
            |...::|:.|||||||..| ...:|..|.|.||||||:||.:..|.:.:|:|::|||..||.|.:
  Rat   560 SHAGILKVGDFGLAREYGSPLKAYTPVVVTLWYRAPELLLGAKEYSTAVDMWSVGCIFGELLTQK 624

  Fly   198 PLFPGSSEVDQLFKICSVLGTPDKDDWPDGYR----LASMIHFRYP-DCIKVPLSSVVSRCSQNG 257
            |||||.||:||:.|:...||||.:..|| ||.    :..|....|| :.::....:::   |..|
  Rat   625 PLFPGKSEIDQINKVFKDLGTPSEKIWP-GYNDLPAVKKMTFSEYPYNNLRKRFGALL---SDQG 685

  Fly   258 LDLLEDMLAYDPDKRPTAQQSLKYPYFHALKRISPTAATKANVRLNSKYAASNGHPVQSVSNNVL 322
            .||:...|.|.|.:|.:|:..||:.||    |.:|.                   |:.|......
  Rat   686 FDLMNKFLTYFPGRRVSAEDGLKHEYF----RETPL-------------------PIDSSMFPTW 727

  Fly   323 PVQEKLQAVTELLHQTNNNMNSHSNLGKNNNLAPKNGGVPRKYQPKLSF--------------LT 373
            |.:.:.|.|                         |.|..||..:..|.:              ||
  Rat   728 PAKSEQQRV-------------------------KRGTSPRPPEGGLGYSQLGDDDLKETGFHLT 767

  Fly   374 TSEMGAGSHADSSSL 388
            |:..||.:.....||
  Rat   768 TTNQGASAAGPGFSL 782

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42366NP_723501.2 STKc_MAK_like 4..284 CDD:270824 106/285 (37%)
Cdk11bNP_665709.2 STKc_CDC2L1 421..712 CDD:173741 106/285 (37%)

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