DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42366 and Cdk6

DIOPT Version :10

Sequence 1:NP_723501.2 Gene:CG42366 / 34319 FlyBaseID:FBgn0259712 Length:706 Species:Drosophila melanogaster
Sequence 2:NP_001178790.1 Gene:Cdk6 / 114483 RGDID:621121 Length:326 Species:Rattus norvegicus


Alignment Length:321 Identity:123/321 - (38%)
Similarity:184/321 - (57%) Gaps:26/321 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RYITLTQLGDGTYGTVVLGQ-RKDTGEKVAIKRMKRKYYSWEEAM---NLREVKSLKKL---SHP 60
            :|..:.::|:|.||.|...: .|:.|..||:||:  :..:.||.|   .:|||..|:.|   .||
  Rat    12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRV--RVQTGEEGMPLSTIREVAVLRHLETFEHP 74

  Fly    61 NIVKLKEVIRENDT-----LYFVFEYMKENLYQMI-KDRDTHLPEPELKSILFQVLTGLAFMHRH 119
            |:|:|.:|...:.|     |..|||::.::|...: |..:..:|...:|.::||:|.||.|:|.|
  Rat    75 NVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH 139

  Fly   120 GFFHRDLKPENLLCSGPDLIKIADFGLAREIRSRPPFTDYVSTRWYRAPEVLLHSTNYGSTIDLW 184
            ...||||||:|:|.:....||:|||||||....:...|..|.|.|||||||||.| :|.:.:|||
  Rat   140 RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQS-SYATPVDLW 203

  Fly   185 AMGCIMAELYTFRPLFPGSSEVDQLFKICSVLGTPDKDDWPDGYRL-ASMIHFRYPDCIKVPLSS 248
            ::|||.|||:..:|||.|||:||||.||..|:|.|.::|||....| ....|.:...    |:..
  Rat   204 SVGCIFAELFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQ----PIEK 264

  Fly   249 VVSRCSQNGLDLLEDMLAYDPDKRPTAQQSLKYPYFHALKRI-----SPTAATKANVRLNS 304
            .|:...:.|.|||...|.::|.||.:|..:|.:|||..|:|.     |..:::::...||:
  Rat   265 FVTDIDELGKDLLLKCLTFNPAKRISAYGALNHPYFQDLERYKDNLHSHLSSSQSTSELNT 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42366NP_723501.2 STKc_MAK_like 4..284 CDD:270824 116/293 (40%)
Cdk6NP_001178790.1 STKc_CDK6 11..300 CDD:270846 116/294 (39%)

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