DRSC/TRiP Functional Genomics Resources

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Protein Alignment TbCMF46 and LRRC46

DIOPT Version :10

Sequence 1:NP_609325.2 Gene:TbCMF46 / 34318 FlyBaseID:FBgn0032163 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_219481.1 Gene:LRRC46 / 90506 HGNCID:25047 Length:321 Species:Homo sapiens


Alignment Length:253 Identity:67/253 - (26%)
Similarity:113/253 - (44%) Gaps:34/253 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 PEPG--IIDRQMI---ETAYLEEGKKGEARRLHQLEPVVYDRITTMRLEFKNILRIDHLWMMPNL 91
            ||.|  .|...:|   ...:.|:|:..| :..|.|     |.:.|:||:.:.|..|.:|..:.||
Human    10 PEEGGVCITEALITKRNLTFPEDGELSE-KMFHTL-----DELQTVRLDREGITTIRNLEGLQNL 68

  Fly    92 TKLCLNCNKIEVIEHLEMLTALKDLNLSFNYITRIENLEKLVKLEKLSLFSNRIRKIENIHTLQN 156
            ..|.|..|||:.||:|..:.:|:.|:|:.|.|.::|||..|..|:.|.|..|.|..::.....|:
Human    69 HSLYLQGNKIQQIENLACIPSLRFLSLAGNQIRQVENLLDLPCLQFLDLSENLIETLKLDEFPQS 133

  Fly   157 LVILSIGNNLIDTVEGIERLRFVSSLKVLNLEGNPIAKQPDFPLSLYVIAILPQLNYYEYVFIKT 221
            |:||::..|.....:|...|...:...:|:|:|.|:.::                      :|..
Human   134 LLILNLSGNSCTNQDGYRELVTEALPLLLDLDGQPVVER----------------------WISD 176

  Fly   222 ETREEAQKRFYRELREIEDKQEREIQGLETEAREMAEADRLASSFVEHLDGMQLYDSL 279
            |..|.:....:.||......:...::.||.|.....| .|..::..|||..|::..:|
Human   177 EEDEASSDEEFPELSGPFCSERGFLKELEQELSRHRE-HRQQTALTEHLLRMEMQPTL 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TbCMF46NP_609325.2 PPP1R42 66..>190 CDD:455733 40/123 (33%)
leucine-rich repeat 69..90 CDD:275378 6/20 (30%)
leucine-rich repeat 91..112 CDD:275378 9/20 (45%)
leucine-rich repeat 113..134 CDD:275378 9/20 (45%)
leucine-rich repeat 135..156 CDD:275378 5/20 (25%)
leucine-rich repeat 157..181 CDD:275378 6/23 (26%)
SMC_prok_B 225..>530 CDD:274008 13/55 (24%)
LRRC46NP_219481.1 LRR 1 45..66 6/20 (30%)
leucine-rich repeat 46..67 CDD:275378 6/20 (30%)
PPP1R42 56..>146 CDD:455733 32/89 (36%)
LRR 2 67..88 10/20 (50%)
leucine-rich repeat 68..89 CDD:275378 9/20 (45%)
LRR 3 89..110 8/20 (40%)
leucine-rich repeat 90..111 CDD:275378 9/20 (45%)
LRR 4 111..132 5/20 (25%)
leucine-rich repeat 112..133 CDD:275378 5/20 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 235..321
DedD 237..>320 CDD:442381
Blue background indicates that the domain is not in the aligned region.

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