DRSC/TRiP Functional Genomics Resources

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Protein Alignment TbCMF46 and Lrguk

DIOPT Version :10

Sequence 1:NP_609325.2 Gene:TbCMF46 / 34318 FlyBaseID:FBgn0032163 Length:566 Species:Drosophila melanogaster
Sequence 2:XP_006506776.1 Gene:Lrguk / 74354 MGIID:1921604 Length:1341 Species:Mus musculus


Alignment Length:309 Identity:77/309 - (24%)
Similarity:127/309 - (41%) Gaps:57/309 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 YDRITTMRLEFKNILRIDHLWMMPNLTKLCLNCNKIEVIEHLEMLTALKDLNLSFNYITRIENLE 130
            |..:|.:.|:...|..|..|....:||.|.|..|||..|:.|..| .:|.|:||.|.|..|..||
Mouse   214 YHTLTQLILDNNEIEEITGLENCISLTHLSLAGNKITTIKGLGTL-PIKVLSLSNNMIETITGLE 277

  Fly   131 KLVKLEKLSLFSNRIRKIENIHTLQNLVILSIGNNLIDTVEGIERLRFVSSLKVLNLEGNPIAKQ 195
            :|..|:.|.|..|:|..::.:.....|.::::.:|.|..:..||.:..:..|:||||..|||..:
Mouse   278 ELKALQNLDLSHNQISSLQGLENHDLLEVINLEDNKIKELSEIEYIENLPILRVLNLLRNPIQTK 342

  Fly   196 PDFPLSLYVIAILPQLNYYEYVFIKTETREEAQKRF--YRELREIEDKQEREIQGLETEAREMAE 258
            |::  ..:||.:|.:|...:...||.|.:..|..::  ..|:..::|.....:       ..|::
Mouse   343 PEY--WFFVIYMLLRLTELDQQKIKVEEKVFAVNKYDPPPEVVAVQDHMTHVV-------NSMSQ 398

  Fly   259 ADRLASSFVEHLDGMQLYDSLWRDDEDGRILMLVGAP-------AQELCEEYSKDVYELTQQIYR 316
            ..|:..|.:..||...            .:|:|.|..       |..||.::|        ..:|
Mouse   399 PQRIWDSTLPSLDAPY------------PMLILTGPAACGKRELAHRLCRQFS--------TYFR 443

  Fly   317 LGLERFGERDEEIRDFNANLHEGQEELQAQGQRQIEDFLEYKERIFDEM 365
            .|.                .|..:.....:|.|  .|:....:.:||||
Mouse   444 YGA----------------CHTTRPPYFGEGDR--VDYHFISQEVFDEM 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TbCMF46NP_609325.2 PPP1R42 66..>190 CDD:455733 41/123 (33%)
leucine-rich repeat 69..90 CDD:275378 5/20 (25%)
leucine-rich repeat 91..112 CDD:275378 10/20 (50%)
leucine-rich repeat 113..134 CDD:275378 10/20 (50%)
leucine-rich repeat 135..156 CDD:275378 5/20 (25%)
leucine-rich repeat 157..181 CDD:275378 5/23 (22%)
SMC_prok_B 225..>530 CDD:274008 25/150 (17%)
LrgukXP_006506776.1 LRR 97..>340 CDD:443914 43/126 (34%)
leucine-rich repeat 131..150 CDD:275380
leucine-rich repeat 151..172 CDD:275380
leucine-rich repeat 173..194 CDD:275380
leucine-rich repeat 195..216 CDD:275380 1/1 (100%)
leucine-rich repeat 217..238 CDD:275380 5/20 (25%)
leucine-rich repeat 258..281 CDD:275380 11/23 (48%)
leucine-rich repeat 282..300 CDD:275380 5/17 (29%)
leucine-rich repeat 304..328 CDD:275380 5/23 (22%)
GMPK 416..537 CDD:238026 17/85 (20%)
PHA03247 <678..1233 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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