DRSC/TRiP Functional Genomics Resources

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Protein Alignment TbCMF46 and Ppp1r42

DIOPT Version :10

Sequence 1:NP_609325.2 Gene:TbCMF46 / 34318 FlyBaseID:FBgn0032163 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_663730.1 Gene:Ppp1r42 / 69312 MGIID:1921138 Length:357 Species:Mus musculus


Alignment Length:370 Identity:87/370 - (23%)
Similarity:128/370 - (34%) Gaps:119/370 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 RITTMRLEFKNILRIDHLWMMPNLTKLCLNCNKIEVIEHLEMLTALKDLNLSFNYITRIENLEKL 132
            :||.:....:||..||.|.:..||:.|.|..|:|..:.:|...|.|..|.|..|.|:.||||..|
Mouse    29 KITHINFSDRNIDSIDDLSLCRNLSVLYLYDNRISQVTNLNYTTNLTHLYLQNNCISCIENLSSL 93

  Fly   133 VKLEKLSLFSNRIRKIENIHTLQ------------------------------NLVILSIGNNLI 167
            .|||||.|..|.|..||.:..|:                              :|..|:|.||.|
Mouse    94 KKLEKLYLGGNYIAVIEGLEGLEELRELHVESQRLPLGEKLLFDPRTLRSLAKSLSTLNISNNNI 158

  Fly   168 DTVEGIE-------------RLRFVSSLKVL----------NLEGNPIAKQPDFPLSLYVIAILP 209
            |.::.:|             :|..|..|::|          :|.|||:..:|.:...|  |....
Mouse   159 DDIKDLEILENLNHLIAVDNQLMHVKDLELLLKKLMKLWKMDLNGNPVCLKPKYRDKL--ILTSK 221

  Fly   210 QLNYYEYVFIKTETRE---------EAQKRFYRELREIEDKQEREIQGLETEAREMAEADRLASS 265
            .|.:.:...||...|:         :|:|...:.....||.....|...||              
Mouse   222 SLEFLDGKEIKDMERQFLMNWKASKDAKKISKKRRSRSEDASNSYISNFET-------------- 272

  Fly   266 FVEHL----------------DGMQLYDSLWRDDEDGRILMLVGAPAQELCEEYSKDVYELTQQI 314
             |.|:                ..:|.|              ||...|...|.:  :|...:|:.|
Mouse   273 -VHHIVPVYYPQVGKPKVIFFSDVQRY--------------LVHGNASSKCSQ--EDKTTITEDI 320

  Fly   315 YRLGLERFGERDEEIRDFNANLHEGQEELQAQGQRQIEDFLEYKE 359
            ..|.|     ::.|......::||..   ..|..:..|:..|.||
Mouse   321 GNLSL-----KESESSLTKNDIHEPH---LLQNPKVKENLSEKKE 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TbCMF46NP_609325.2 PPP1R42 66..>190 CDD:455733 49/174 (28%)
leucine-rich repeat 69..90 CDD:275378 7/20 (35%)
leucine-rich repeat 91..112 CDD:275378 6/20 (30%)
leucine-rich repeat 113..134 CDD:275378 10/20 (50%)
leucine-rich repeat 135..156 CDD:275378 10/50 (20%)
leucine-rich repeat 157..181 CDD:275378 10/36 (28%)
SMC_prok_B 225..>530 CDD:274008 28/160 (18%)
Ppp1r42NP_663730.1 PPP1R42 27..246 CDD:411060 59/218 (27%)
LRR 1 29..50 7/20 (35%)
leucine-rich repeat 31..51 CDD:275380 6/19 (32%)
LRR 2 51..72 7/20 (35%)
LRR 3 73..94 9/20 (45%)
leucine-rich repeat 74..95 CDD:275380 10/20 (50%)
LRR 4 95..116 10/20 (50%)
leucine-rich repeat 96..147 CDD:275380 10/50 (20%)
LRR 5 117..138 0/20 (0%)
LRR 6 147..168 8/20 (40%)
leucine-rich repeat 148..169 CDD:275380 8/20 (40%)
LRR 7 169..190 3/20 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 329..357 6/30 (20%)

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