DRSC/TRiP Functional Genomics Resources

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Protein Alignment TbCMF46 and CG14185

DIOPT Version :10

Sequence 1:NP_609325.2 Gene:TbCMF46 / 34318 FlyBaseID:FBgn0032163 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_649175.1 Gene:CG14185 / 40197 FlyBaseID:FBgn0036936 Length:402 Species:Drosophila melanogaster


Alignment Length:280 Identity:58/280 - (20%)
Similarity:99/280 - (35%) Gaps:84/280 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DAVEETEEEPLRGFLEEI------NCPEPGIID--RQMIETAYLEEGKKGEARRLHQLEPVVYDR 68
            |.....||:.|..|:..:      ..|||.:.:  |::.:...||..::...|       |:...
  Fly    76 DVAIAEEEQHLPAFVHLLPVVLPQQGPEPTLDELLRRVTQRTDLEAVEQVRLR-------VISYT 133

  Fly    69 ITTMRLEFKNILRIDHLWMMPNLTKLCLNCNKIEVIEHLEMLTALKDLNLSFNYITRI------- 126
            ::..||..          .:|.|..|.|:.:         :|::|:||......:||:       
  Fly   134 VSLSRLSL----------FLPRLQSLDLSGS---------VLSSLRDLGYGLLQLTRLDISNCGL 179

  Fly   127 ---ENLEKLVKLEKLSLFSNRIRKIENIHTLQNLVILSIGNNLIDTVEGIERLRFVSSLKVLNLE 188
               :....|..:..|....|.|::::.:..|.:|.:|...||.|..:..:..|.....|:.:.|:
  Fly   180 NSFDGTSGLPAIRVLIADGNMIQRVDPLAELVHLRVLKARNNRISELGLLSFLGMCPQLQEVELQ 244

  Fly   189 GNPIAKQPDFPLSLYVIAILPQLNYYEYVFIKTETREEAQKRFYREL--REIEDKQ---EREIQG 248
            |||:.:.|                                  .||.|  |.:...|   .|.:.|
  Fly   245 GNPVCRLP----------------------------------LYRSLLARSVPTLQLLDGRVLNG 275

  Fly   249 LETEAREMAEADRLASSFVE 268
             |....||.||...|||.:|
  Fly   276 -EPAPVEMEEATSPASSDLE 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TbCMF46NP_609325.2 PPP1R42 66..>190 CDD:455733 25/133 (19%)
leucine-rich repeat 69..90 CDD:275378 2/20 (10%)
leucine-rich repeat 91..112 CDD:275378 4/20 (20%)
leucine-rich repeat 113..134 CDD:275378 6/30 (20%)
leucine-rich repeat 135..156 CDD:275378 4/20 (20%)
leucine-rich repeat 157..181 CDD:275378 6/23 (26%)
SMC_prok_B 225..>530 CDD:274008 16/49 (33%)
CG14185NP_649175.1 leucine-rich repeat 146..168 CDD:275380 7/30 (23%)
PPP1R42 <169..271 CDD:455733 24/135 (18%)
leucine-rich repeat 169..190 CDD:275380 3/20 (15%)
leucine-rich repeat 191..212 CDD:275380 4/20 (20%)
leucine-rich repeat 213..237 CDD:275380 6/23 (26%)

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