DRSC/TRiP Functional Genomics Resources

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Protein Alignment TbCMF46 and Lrrc43

DIOPT Version :10

Sequence 1:NP_609325.2 Gene:TbCMF46 / 34318 FlyBaseID:FBgn0032163 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_001028633.1 Gene:Lrrc43 / 381741 MGIID:2685907 Length:667 Species:Mus musculus


Alignment Length:433 Identity:101/433 - (23%)
Similarity:159/433 - (36%) Gaps:99/433 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PGEDAVEETEEEPLRGFLEEINCPEPGIIDRQMIETAYLEEGKKGEARRLHQL---EPVV----- 65
            |.|:.....|||.:...|        |::.......|.|::. ..|.|.|.:|   .|::     
Mouse    66 PKEEETLVPEEETVEALL--------GLVRSNHSPWAMLKDA-SAEDRFLRELAIQNPLMIKDTF 121

  Fly    66 -YDRITTMRLEFKNILRID-HLWMMPNLTKLCLNCNKIEVIEHLEMLTALKDLNLSFNYITRIEN 128
             |....::|:..|.:..:| .|.....|.:|.|:.||||.|:...:...||.|.|..|.|..:|.
Mouse   122 FYSYFRSLRVVNKGVSLVDKDLLKFLKLEELVLSANKIEEIDANNLPPTLKVLELYGNLIASMEC 186

  Fly   129 L--EKLVKLEKLSLFSNR-IRKIENI----HTLQNLVILSIG-NNLIDTVEGIERLRFVSSLKVL 185
            |  ....:|:.|.|..|: :..:|::    |....||.|.:| |||.|....|..|..:..|::|
Mouse   187 LCSAPPPRLQHLGLGHNKLLGPLESLYVTSHNWPQLVSLDLGFNNLTDLQNMILGLSTLRHLRLL 251

  Fly   186 NLEGNPIAKQP---DFPL-SLYVIAILPQLNYYEYVFIKTETREEAQKRFYRELREIEDKQEREI 246
            .|:|||::..|   .|.: ||..:.:|..:           |....:|..:|.|....|...||.
Mouse   252 VLQGNPLSLVPYYRGFTIDSLAHLCVLDDI-----------TVSPNEKHQFRGLNIHGDLLAREA 305

  Fly   247 QGLETEAREMAEADRLASSFVEHLDGMQ----------LYDSLWRDDEDGRILMLVGAPAQE-LC 300
            |.:.|........|   ||.::...|..          .||.:..:|.:..:..||.|...: :.
Mouse   306 QFVVTIGNVRGVLD---SSILDPEPGPDGPFISYSYYVTYDFVEDEDMERNVSGLVEATHHDSVL 367

  Fly   301 EEYSKDVYELTQQIYRLGLERFGERDEEIRDFN----ANLHEGQEELQAQGQRQIEDFLEYKERI 361
            :|..|               .|...|||.:..:    .:.|.|::........::..  |..|.|
Mouse   368 DEIDK---------------HFSGTDEEDQQEDPLDGRHRHRGRQRFHPGSTEEMSK--ELSEFI 415

  Fly   362 FDEM-------------RLKWRE---------LDQRDDDLEQL 382
            ..||             .:.|.|         |.|..|..|:|
Mouse   416 AKEMSQMAEGSVESGITEVDWSETSISIHSAPLPQSIDSSEEL 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TbCMF46NP_609325.2 PPP1R42 66..>190 CDD:455733 40/132 (30%)
leucine-rich repeat 69..90 CDD:275378 4/21 (19%)
leucine-rich repeat 91..112 CDD:275378 8/20 (40%)
leucine-rich repeat 113..134 CDD:275378 8/22 (36%)
leucine-rich repeat 135..156 CDD:275378 6/25 (24%)
leucine-rich repeat 157..181 CDD:275378 10/24 (42%)
SMC_prok_B 225..>530 CDD:274008 38/195 (19%)
Lrrc43NP_001028633.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
LRR 1 148..169 8/20 (40%)
PPP1R42 154..291 CDD:455733 43/147 (29%)
LRR 2 170..191 8/20 (40%)
leucine-rich repeat 171..194 CDD:275378 8/22 (36%)
LRR 3 194..213 5/18 (28%)
leucine-rich repeat 195..221 CDD:275378 6/25 (24%)
LRR 4 221..242 9/20 (45%)
leucine-rich repeat 222..247 CDD:275378 10/24 (42%)
leucine-rich repeat 248..259 CDD:275378 6/10 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 374..407 6/32 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 533..570
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 616..640
Blue background indicates that the domain is not in the aligned region.

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