DRSC/TRiP Functional Genomics Resources

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Protein Alignment TbCMF46 and PPP1R42

DIOPT Version :10

Sequence 1:NP_609325.2 Gene:TbCMF46 / 34318 FlyBaseID:FBgn0032163 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_001351839.1 Gene:PPP1R42 / 286187 HGNCID:33732 Length:271 Species:Homo sapiens


Alignment Length:211 Identity:62/211 - (29%)
Similarity:86/211 - (40%) Gaps:55/211 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 RITTMRLEFKNILRIDHLWMMPNLTKLCLNCNKIEVIEHLEMLTALKDLNLSFNYITRIENLEKL 132
            :||.:....|||..|:.|.:..||:.|.|..|.|..|.:|...|.|..|.|..|.|:.||||..|
Human    29 KITHINFSDKNIDAIEDLSLCKNLSVLYLYDNCISQITNLNYATNLTHLYLQNNCISCIENLRSL 93

  Fly   133 VKLEKLSLFSNRIRKIE-----------------------------NIHTL-QNLVILSIGNNLI 167
            .|||||.|..|.|..||                             .:|:| ::|.||:|.||.|
Human    94 KKLEKLYLGGNYIAVIEGLEGLGELRELHVENQRLPLGEKLLFDPRTLHSLAKSLCILNISNNNI 158

  Fly   168 DTVEGIE-------------RLRFVSSLKVL----------NLEGNPIAKQPDFPLSLYVIAILP 209
            |.:..:|             :|..|..|:.|          :|.|||:..:|.:...|  |.:..
Human   159 DDITDLELLENLNQLIAVDNQLLHVKDLEFLLNKLMKLWKIDLNGNPVCLKPKYRDRL--ILVSK 221

  Fly   210 QLNYYEYVFIKTETRE 225
            .|.:.:...||...|:
Human   222 SLEFLDGKEIKNIERQ 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TbCMF46NP_609325.2 PPP1R42 66..>190 CDD:455733 52/174 (30%)
leucine-rich repeat 69..90 CDD:275378 7/20 (35%)
leucine-rich repeat 91..112 CDD:275378 7/20 (35%)
leucine-rich repeat 113..134 CDD:275378 10/20 (50%)
leucine-rich repeat 135..156 CDD:275378 11/50 (22%)
leucine-rich repeat 157..181 CDD:275378 11/36 (31%)
SMC_prok_B 225..>530 CDD:274008 0/1 (0%)
PPP1R42NP_001351839.1 PPP1R42 27..246 CDD:411060 62/211 (29%)
LRR 1 29..50 7/20 (35%)
leucine-rich repeat 31..51 CDD:275380 6/19 (32%)
LRR 2 51..72 8/20 (40%)
LRR 3 73..94 9/20 (45%)
leucine-rich repeat 74..95 CDD:275380 10/20 (50%)
LRR 4 95..116 10/20 (50%)
leucine-rich repeat 96..117 CDD:275380 9/20 (45%)
LRR 5 117..138 0/20 (0%)
leucine-rich repeat 118..147 CDD:275380 2/28 (7%)
LRR 6 147..168 9/20 (45%)
LRR 7 169..190 3/20 (15%)

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