DRSC/TRiP Functional Genomics Resources

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Protein Alignment TbCMF46 and LOC1277447

DIOPT Version :10

Sequence 1:NP_609325.2 Gene:TbCMF46 / 34318 FlyBaseID:FBgn0032163 Length:566 Species:Drosophila melanogaster
Sequence 2:XP_316916.4 Gene:LOC1277447 / 1277447 VectorBaseID:AGAMI1_002003 Length:188 Species:Anopheles gambiae


Alignment Length:193 Identity:52/193 - (26%)
Similarity:95/193 - (49%) Gaps:13/193 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 MIETAYLEEGKKGEARRLHQLEPVVYDRITTMRLEFK--NILRID-HLWMMPNLTKLCLNCNKIE 102
            |..:..::|..|.........:||   ....::|:|:  .|.::| .|..:.|..||.|:.|.||
Mosquito     1 MARSTSIKEALKRWQEEHEGQDPV---EAADIQLQFRWPPIEKMDGTLGTLVNCQKLSLSSNMIE 62

  Fly   103 VIEHLEMLTALKDLNLSFNYITRIENLEKLVK-LEKLSLFSNRIRKIENIHTLQNLVILSIGNNL 166
            .|..|..:..|:.|.|..|||..:..:|.:.: ||:|.:..|.|.|::.:.:|:.|.:|.:.||.
Mosquito    63 KIAGLNGMKNLRILALGRNYIKSLSGIEVVGETLEELWISYNLIDKLKGVESLRKLKVLYMANNS 127

  Fly   167 IDTVEGIERLRFV-SSLKVLNLEGNPIAKQPDFPLSLYVIAI---LPQLNYYEYVFIKTETRE 225
            :.....:.:|:.: |:|:.|...|||:.:  :...::||..:   ||.|...:.|.:.||..:
Mosquito   128 VRDWGELAKLQAIASTLEDLVFAGNPLVE--NLEEAVYVREVTKRLPTLKKLDGVPMLTEDED 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TbCMF46NP_609325.2 PPP1R42 66..>190 CDD:455733 36/128 (28%)
leucine-rich repeat 69..90 CDD:275378 5/23 (22%)
leucine-rich repeat 91..112 CDD:275378 8/20 (40%)
leucine-rich repeat 113..134 CDD:275378 7/20 (35%)
leucine-rich repeat 135..156 CDD:275378 7/20 (35%)
leucine-rich repeat 157..181 CDD:275378 5/24 (21%)
SMC_prok_B 225..>530 CDD:274008 0/1 (0%)
LOC1277447XP_316916.4 None

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