DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4592 and fadJ

DIOPT Version :10

Sequence 1:NP_609324.2 Gene:CG4592 / 34317 FlyBaseID:FBgn0032162 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_416843.1 Gene:fadJ / 949097 ECOCYCID:G7212 Length:714 Species:Escherichia coli


Alignment Length:239 Identity:69/239 - (28%)
Similarity:106/239 - (44%) Gaps:30/239 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 TSKLT-TIEVDDRSGIATLSMNLP--PVNTLTMELMHDLIDSINQIESNKS-RGLILTSSNDKVF 91
            ||..| .:.:|:   ||.:::::|  .:|||..|....:...|.|:..||. ||::..|:....|
E. coli     4 TSAFTLNVRLDN---IAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNF 65

  Fly    92 SAGLDLNEMLN----PDVERLRLFWTRFQDLWLALHLCGLPTAAAINGHSPAAGCVLATACEYRV 152
            .||.|:|.:.|    .:.|.|.   .:.|.|...:|...:...|||:|.....|..||.||..||
E. coli    66 IAGADINMIGNCKTAQEAEALA---RQGQQLMAEIHALPIQVIAAIHGACLGGGLELALACHGRV 127

  Fly   153 ML--PNLFIGIHATRFSFVISKWMMNSYQSVLPRRI-VERALNQ---GKLFASQEALDVGLVDEI 211
            ..  |...:|:...:...:..    :.....|||.| |..||..   ||...:::||.:||||::
E. coli   128 CTDDPKTVLGLPEVQLGLLPG----SGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDV 188

  Fly   212 ACSKEEALSKCAAFIATFDKTNPVARCL--TKRMCREPDVRELL 253
            .  ....|.:.|..:|  .|..|.:|.|  .:|:...|..|.||
E. coli   189 V--PHSILLEAAVELA--KKERPSSRPLPVRERILAGPLGRALL 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4592NP_609324.2 crotonase-like 43..287 CDD:474030 65/226 (29%)
fadJNP_416843.1 fadJ 1..708 CDD:236864 69/239 (29%)

Return to query results.
Submit another query.