DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4592 and ech-4

DIOPT Version :10

Sequence 1:NP_609324.2 Gene:CG4592 / 34317 FlyBaseID:FBgn0032162 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_001366707.1 Gene:ech-4 / 174665 WormBaseID:WBGene00001153 Length:385 Species:Caenorhabditis elegans


Alignment Length:290 Identity:59/290 - (20%)
Similarity:109/290 - (37%) Gaps:45/290 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 GQSLRSLANGATSKLTTIEVDDRSGIATLSMNLP-PVNTLTMELMHDLIDSINQIESNKSRGLIL 83
            |.|:..|.|     :..:.|.....:..:::|.| ..|.||:|:...:..::....::||..:.:
 Worm   117 GPSIEGLEN-----VDGLSVTREGKVFKIALNRPKKFNALTLEMYQGIQKALEVSNNDKSTSITV 176

  Fly    84 TSSNDKVFSAGLDL----------NEMLNPDVERLRLFWTRFQDLWLALHLCGLPTAAAINGHSP 138
            .::|...:.||.||          .|.:.......::....:.:.::...   .|..|.|||  |
 Worm   177 ITANGSYYCAGNDLTNFKAAAGGTKEQIADMANTAKVIMKDYVNAYINHE---KPLIALING--P 236

  Fly   139 AAGCVLATACEYRVMLPNLFIGIHATRFSFVISKWMMNSYQSVL---PRRIVERALNQGKLFASQ 200
            |.|..:.....:..::.......|........|...::||...|   ..|..|..|...|: ::|
 Worm   237 AVGIAVTVLGMFDYVIATDKASFHTPFAPLGQSPEGVSSYTFPLIMGSLRASEMLLVCKKI-SAQ 300

  Fly   201 EALDVGLVDEIACSKEEALSKCAAFIATFDKTNPVARCLTKRMCREPDVRELLQ------DRAAD 259
            .|.|.|||:|:. ...|..|.....:..|.:..|....:.|::.|.....:||:      |:..:
 Worm   301 TAKDYGLVNEVV-PDAEFQSHAQKTVEAFSQLPPETLRINKKLLRSLHKEKLLEVNNIEADQICE 364

  Fly   260 ---LKECVDYVTTPLFQEGLCAHL-EGLKK 285
               .|||         .:.:.|.: :|.||
 Worm   365 RWQSKEC---------HQAIAAFMTKGAKK 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4592NP_609324.2 crotonase-like 43..287 CDD:474030 54/267 (20%)
ech-4NP_001366707.1 ACBP 25..109 CDD:238248
CaiD 129..381 CDD:440647 52/267 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.