DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4598 and echdc1

DIOPT Version :9

Sequence 1:NP_001260304.1 Gene:CG4598 / 34315 FlyBaseID:FBgn0032160 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_001315065.1 Gene:echdc1 / 553585 ZFINID:ZDB-GENE-050522-370 Length:302 Species:Danio rerio


Alignment Length:246 Identity:53/246 - (21%)
Similarity:113/246 - (45%) Gaps:35/246 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 TVEVN--DKTGIATLTMNRPP-VNGLNLELLQDLKSSIDEIESNKSRGLILTSSSSTIFSAGLDI 88
            :||:.  .::|||.||::.|. :|..:..::.:|:..::|:|.......::...::..|.:|.|:
Zfish    48 SVELQKLQESGIAVLTVSNPARMNAFSGCMMLELEQRVNELEIWTEGKAVIVQGAAGNFCSGSDL 112

  Fly    89 LEMYKPDKDRIRAFWTQ---------LQDTWLALYGSSVPTAAAINGHSPAGGCLLATSCEYRVM 144
                    :.:||....         :|:|...|....:.:.|.:.|.:..||..|.|:|::|:|
Zfish   113 --------NAVRAIANPHDGMKMCEFMQNTLARLLRLPLISVALVEGRALGGGAELTTACDFRLM 169

  Fly   145 VPNFTIGLNETQLGIVAPQW-FMASFLSVLPQRIAERALNQGRMFTTEEALKVGLIDET---ANN 205
            ..:..|......:|:| |.| ..|..:.::..|.|.:.|:..|....:...::||:||.   ::.
Zfish   170 TSDAVIQFVHKHMGLV-PGWGGAARLVGIIGSRNALKLLSGARKVDPDYGKQMGLVDEVLQCSSG 233

  Fly   206 KEEAIEKCVAFIGTFAK-VNPLARSLTKQQFRAADLQQLQNGRKEDLEKFL 255
            :.:|:.....:|..|.| ..|:.:::.|         .:.:||:..|::.|
Zfish   234 EGKALAHAEHWIAPFIKGPAPVIQAIKK---------VVVSGRELSLDEAL 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4598NP_001260304.1 crotonase-like 27..217 CDD:119339 44/205 (21%)
echdc1NP_001315065.1 crotonase-like 55..244 CDD:119339 42/197 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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