DRSC/TRiP Functional Genomics Resources

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Protein Alignment yip2 and Mtpbeta

DIOPT Version :9

Sequence 1:NP_523528.1 Gene:yip2 / 34313 FlyBaseID:FBgn0040064 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_477378.1 Gene:Mtpbeta / 37784 FlyBaseID:FBgn0025352 Length:469 Species:Drosophila melanogaster


Alignment Length:431 Identity:141/431 - (32%)
Similarity:206/431 - (47%) Gaps:49/431 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TKGIYIVAAKRTAFGTFGGSLKGINQTQLQTTAAKAALDAAGLKGEQVDTVIVGNVIASSSTDGI 69
            ::.|.:|...||.|.|.|.:...:...:|...:..:.|....|..|.:|.::.|:||....|..|
  Fly    41 SQNIVLVDGVRTPFLTSGTTYSKLMPHELARHSLLSLLQKNRLDKELIDYIVYGSVIQEVKTSNI 105

  Fly    70 YVPRHVGLNCGVPIEKPALGINRLCGSGFQSIVNGAQDILVGGAKIALTGGVENMSQSPFIARNV 134
              .|...|..|...:.||..:...|.|...:|..|...|......:.:.||||.||..|.  |:.
  Fly   106 --AREAALAAGFSNKTPAHTVTMACISSNAAITTGMGLIATNTYDVIVAGGVEFMSDVPI--RHS 166

  Fly   135 RFGTTLGASYNLEDALW--AGLTDTY------CKLP----------MALTAENLADQYKISRERV 181
            |...:|....|....|.  ..|..|:      .:||          |..:|:.||..:.:||...
  Fly   167 RKMRSLLLKANKAKTLGQRLALLSTFRPDFLAPELPAVAEFSSGETMGHSADRLASAFNVSRSEQ 231

  Fly   182 DEFSLLSQKNWEKGQKEGAFNAEITPIKLKVKGKEVDFVVDEHPRPK-TTIEGLNKL-PSLFKKN 244
            ||::|.|....::.|::|.| .::.|  .||.|  ||.:||:....: ::.|.|.|| |:..|..
  Fly   232 DEYALRSHTLAKEAQEKGYF-TDLVP--FKVSG--VDQIVDKDNGIRVSSPESLAKLRPAFVKPY 291

  Fly   245 GVVTAGTASGICDGASAVIVASEEALKEYNLKPLARLVAFSFVGVKP--EIMGIGPVPAIQNVLK 307
            |.|||..||.:.|||||.|:.:||..|:..|||.|.|..|.||...|  ::: :||...|..:||
  Fly   292 GTVTAANASFLTDGASACIIMTEEKAKQLGLKPKAYLRDFLFVSQDPVNQLL-LGPAYGIPKLLK 355

  Fly   308 VSGKKLEDIDLIEINEAFAAQTLA----------CADALKL-------DTSKLNVNGGAIALGHP 355
            .:|..|:|||..||:||||.|.:|          |...|.|       |.||.|..||::::|||
  Fly   356 KAGLTLKDIDSWEIHEAFAGQIVANLKALDSDWFCKTYLGLNEKVGTPDLSKWNNWGGSLSIGHP 420

  Fly   356 LGASGSRITGHLVHELQRKKLKYGIGSACIGGGQGIALLLE 396
            ..|:|.|:..|..:.|.|:..|.|:.:||..||||:|:|:|
  Fly   421 FAATGVRLCMHTANRLVREDGKLGVVAACAAGGQGVAMLIE 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yip2NP_523528.1 PRK05790 6..398 CDD:180261 141/430 (33%)
thiolase 9..397 CDD:238383 140/427 (33%)
MtpbetaNP_477378.1 fadI 44..462 CDD:181597 141/428 (33%)
thiolase 45..462 CDD:238383 140/427 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45448485
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0183
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1129049at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18919
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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