DRSC/TRiP Functional Genomics Resources

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Protein Alignment yip2 and hadhb

DIOPT Version :10

Sequence 1:NP_523528.1 Gene:yip2 / 34313 FlyBaseID:FBgn0040064 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_956313.1 Gene:hadhb / 336606 ZFINID:ZDB-GENE-030131-8550 Length:471 Species:Danio rerio


Alignment Length:429 Identity:137/429 - (31%)
Similarity:204/429 - (47%) Gaps:46/429 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KGIYIVAAKRTAFGTFGGSLKGINQTQLQTTAAKAALDAAGLKGEQVDTVIVGNVIASSSTDGIY 70
            |.|.:|...||.|...|.:...:....|...|.:..|...|:..:.||.::.|.||....|..  
Zfish    49 KNIVLVEGVRTPFLLSGTTYSDLMPHDLARAALQGLLKRTGIPKDAVDYIVYGAVIQEVKTSN-- 111

  Fly    71 VPRHVGLNCGVPIEKPALGINRLCGSGFQSIVNGAQDILVGGAKIALTGGVENMSQSPF-IARNV 134
            |.|...|..|...:.||..:...|.|..|::......|..|.....:.||||.||..|. .:|.:
Zfish   112 VAREAALGAGFSDKTPAHTVTMACISSNQAMTTAVGLIAAGQCDAVVAGGVEFMSDVPIRHSRKM 176

  Fly   135 R-------FGTTLGASYNLEDALWAGLTDTYCKLP----------MALTAENLADQYKISRERVD 182
            |       ...||||..:|..::  .|.....:||          |..:|:.||..:.:||...|
Zfish   177 RKTMLSLNKAKTLGARLSLLGSI--RLAHLAPELPAVAELSTAETMGHSADRLAAAFGVSRLEQD 239

  Fly   183 EFSLLSQKNWEKGQKEGAFNAEITPIKLKVKGKEVDFVVDEHPRPKTTIEGLNKL-PSLFKKNGV 246
            ||:|.|....:|.| :|...:::  :..:|.||:: ...|...|| :|:|.:.|| |:..|.:|.
Zfish   240 EFALRSHTLAKKAQ-DGGLLSDV--VGFEVPGKDI-VSKDNGIRP-STMEQMAKLKPAFVKPHGT 299

  Fly   247 VTAGTASGICDGASAVIVASEEALKEYNLKPLARLVAFSFVGVKP-EIMGIGPVPAIQNVLKVSG 310
            |||..:|.:.||||||::.|||.......||.|.|..|.:|...| :.:.:||..|...||:.||
Zfish   300 VTAANSSFLTDGASAVLIMSEEKALAMGYKPKAYLRDFVYVSQDPKDQLLLGPTYATPKVLEKSG 364

  Fly   311 KKLEDIDLIEINEAFAAQTLACADALKLD-----------------TSKLNVNGGAIALGHPLGA 358
            ..::|||:.|.:||||.|.:|...|:..|                 ..|.|..||:::||||.||
Zfish   365 LTMDDIDVFEFHEAFAGQIMANLKAMGSDWFAQTYMGRKTKVGVPPMEKFNTWGGSLSLGHPFGA 429

  Fly   359 SGSRITGHLVHELQRKKLKYGIGSACIGGGQGIALLLEA 397
            :|.|:...:.|.||::..:||:.:||..||||.|:::||
Zfish   430 TGCRLVTTVAHRLQKEGGQYGLVAACAAGGQGHAMVIEA 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yip2NP_523528.1 thiolase 9..397 CDD:238383 133/424 (31%)
hadhbNP_956313.1 thiolase 52..468 CDD:238383 133/424 (31%)

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