DRSC/TRiP Functional Genomics Resources

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Protein Alignment yip2 and Acat1

DIOPT Version :9

Sequence 1:NP_523528.1 Gene:yip2 / 34313 FlyBaseID:FBgn0040064 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_058771.2 Gene:Acat1 / 25014 RGDID:2016 Length:424 Species:Rattus norvegicus


Alignment Length:391 Identity:153/391 - (39%)
Similarity:226/391 - (57%) Gaps:9/391 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IYIVAAKRTAFGTFGGSLKGINQTQLQTTAAKAALDAAGLKGEQVDTVIVGNVIASSSTDGIYVP 72
            :.||:|.||..|:|.|||.....|:|.|.|.:.|::.||:..|:|..|.:||||...  :|....
  Rat    39 VVIVSATRTPIGSFLGSLASQPATKLGTIAIQGAIEKAGIPKEEVKEVYMGNVIQGG--EGQAPT 101

  Fly    73 RHVGLNCGVPIEKPALGINRLCGSGFQSIVNGAQDILVGGAKIALTGGVENMSQSPFIARNVRFG 137
            |...|..|:||..|...:|::|.||.::|:..:|.::.|...:.:.||:|:||..|::...   |
  Rat   102 RQATLGAGLPIATPCTTVNKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMSR---G 163

  Fly   138 TTLGASYNLEDALWA-GLTDTYCKLPMALTAENLADQYKISRERVDEFSLLSQKNWEKGQKEGAF 201
            .|......|||.:.. ||||.|.|:.|...|||.|.:..||||..|::::.|....::....|.|
  Rat   164 ATPYGGVKLEDLIVKDGLTDVYNKIHMGNCAENTAKKLSISREEQDKYAIGSYTRSKEAWDAGKF 228

  Fly   202 NAEITPIKLKVKGKEVDFVVDEHPRPKTTIEGLNKLPSLF-KKNGVVTAGTASGICDGASAVIVA 265
            ..|||||.:.||||....|.::....:.....:.||.::| |:||.|||..||.:.|||:||::.
  Rat   229 ANEITPITISVKGKPDVVVKEDEEYKRVDFSKVPKLKTVFQKENGTVTAANASTLNDGAAAVVLM 293

  Fly   266 SEEALKEYNLKPLARLVAFSFVGVKPEIMGIGPVPAIQNVLKVSGKKLEDIDLIEINEAFAAQTL 330
            :.||.:...:|||||:.||:...|.|....:.|..|:..|||.:|.|.|||.:.|:||||:...|
  Rat   294 TAEAAQRLKVKPLARIAAFADAAVDPIDFPLAPAYAVPKVLKYAGLKKEDIAMWEVNEAFSVVVL 358

  Fly   331 ACADALKLDTSKLNVNGGAIALGHPLGASGSRITGHLVHELQRKKLKYGIGSACIGGGQGIALLL 395
            |....|::|..|:||:|||::||||:|.||:||..||.|.|  |:.::|:.|.|.|||...|:|:
  Rat   359 ANIKMLEIDPQKVNVHGGAVSLGHPIGMSGARIVVHLAHAL--KQGEFGLASICNGGGGASAVLI 421

  Fly   396 E 396
            |
  Rat   422 E 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yip2NP_523528.1 PRK05790 6..398 CDD:180261 153/391 (39%)
thiolase 9..397 CDD:238383 153/390 (39%)
Acat1NP_058771.2 PLN02644 38..424 CDD:215347 153/391 (39%)
thiolase 40..423 CDD:238383 153/390 (39%)
Coenzyme A binding. /evidence=ECO:0000250|UniProtKB:P24752 255..257 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0183
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D321628at33208
OrthoFinder 1 1.000 - - FOG0000432
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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