DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yip2 and Acaa1b

DIOPT Version :10

Sequence 1:NP_523528.1 Gene:yip2 / 34313 FlyBaseID:FBgn0040064 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_666342.1 Gene:Acaa1b / 235674 MGIID:3605455 Length:424 Species:Mus musculus


Alignment Length:403 Identity:149/403 - (36%)
Similarity:215/403 - (53%) Gaps:20/403 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSAATKGIYIVAAKRTAFGTFG-GSLKGINQTQLQTTAAKAALDAAGLKGEQVDTVIVGNVIASS 64
            :.|:...:.:|..:||..|... |..|.....:|.:....|.|....||.||:..:.||||:...
Mouse    31 LQASASDVVVVHGRRTPIGRASRGCFKDTTPDELLSAVLTAVLQDVKLKPEQLGDISVGNVLQPG 95

  Fly    65 STDGIYVPRHVGLNCGVPIEKPALGINRLCGSGFQSIVNGAQDILVGGAKIALTGGVENMSQSPF 129
            :  |..:.|......|:|...|...:||.|.||.|::.|.|..|..|...|.:..|||:|:.|  
Mouse    96 A--GAIMARIAQFLSGIPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMTLS-- 156

  Fly   130 IARNVRFGTTLGASYNLEDALWAGLTDTYCKLPMALTAENLADQYKISRERVDEFSLLSQKNWEK 194
                     ..|...|:...|........|.:||.:|:||:|:::.:||::.|.|:|.||:....
Mouse   157 ---------QRGNHGNISSRLLENEKARDCLIPMGITSENVAERFGVSRQKQDAFALASQQKAAS 212

  Fly   195 GQKEGAFNAEITPIKLKV---KG--KEVDFVVDEHPRPKTTIEGLNKLPSLFKKNGVVTAGTASG 254
            .|..|.|:|||.|:...|   ||  |.:....||..||.||::||.||...||..|..|||.:|.
Mouse   213 AQSRGCFHAEIVPVTTTVLNDKGDKKTITVSQDEGVRPSTTMQGLAKLKPAFKDGGSTTAGNSSQ 277

  Fly   255 ICDGASAVIVASEEALKEYNLKPLARLVAFSFVGVKPEIMGIGPVPAIQNVLKVSGKKLEDIDLI 319
            :.|||:||::|.....:|..|..|..|.:::.|||.|::|||||..||...|:.:|..:.|||:.
Mouse   278 VSDGAAAVLLARRSKAEELGLPILGVLRSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIF 342

  Fly   320 EINEAFAAQTLACADALKLDTSKLNVNGGAIALGHPLGASGSRITGHLVHELQRK-KLKYGIGSA 383
            |||||||:|.:.|.:.|.:...|:|..|||||||||||.:|:|....|::||:|: :..||:.|.
Mouse   343 EINEAFASQAVYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRAYGVVSM 407

  Fly   384 CIGGGQGIALLLE 396
            |||.|.|.|.:.|
Mouse   408 CIGTGMGAAAVFE 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yip2NP_523528.1 thiolase 9..397 CDD:238383 148/395 (37%)
Acaa1bNP_666342.1 PLN02287 1..420 CDD:215161 148/401 (37%)
PTS2-type peroxisomal targeting signal. /evidence=ECO:0000250|UniProtKB:P09110 1..26
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.