DRSC/TRiP Functional Genomics Resources

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Protein Alignment yip2 and B0303.3

DIOPT Version :9

Sequence 1:NP_523528.1 Gene:yip2 / 34313 FlyBaseID:FBgn0040064 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_498915.1 Gene:B0303.3 / 176216 WormBaseID:WBGene00015125 Length:448 Species:Caenorhabditis elegans


Alignment Length:436 Identity:135/436 - (30%)
Similarity:204/436 - (46%) Gaps:46/436 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SAATK----GIYIVAAKRTAFGTFGGSLKGINQTQLQTTAAKAALDAAGLKGEQVDTVIVGNVIA 62
            ||..|    .|.:|.|.||.|...|...|.:....||..|.||.::...|..||:|.:|.|.||.
 Worm    16 SAVAKKNMPNIVLVDAVRTPFVVSGTVFKDLMAVDLQKEAIKALVEKTKLPYEQLDHIICGTVIQ 80

  Fly    63 SSSTDGIYVPRHVGLNCGVPIEKPALGINRLCGSGFQSIVNGAQDILVGGAKIALTGGVENMSQS 127
            ...|..|  .|...|..|||.:.||..:...|.|...::..|...:..|.|...:.||||.:|..
 Worm    81 ECKTSNI--AREAALLAGVPDKIPAHTVTLACISSNVAMTTGMGMLATGNANAIIAGGVELLSDV 143

  Fly   128 PF-IARNVRFGTTLGAS----------------YNLEDALWAGLTDTYCKLPMALTAENLADQYK 175
            |. ..||.| ...||.:                .||.......:.:......|..:.:.||..:.
 Worm   144 PIRYNRNAR-KAMLGMNKAKDVPSKLKIGGQIVKNLLSPELPAVAEFSTGETMGHSGDRLAAAFN 207

  Fly   176 ISRERVDEFSLLSQKNWEKGQKEGAFNAEITPIKLKVKGKEVDFVVDEHPRPKTTIEGLNKL-PS 239
            :||...|||::.|.....:..|.|.| .::.|:.|  .||:...:.:::....:|:|.|:.| |:
 Worm   208 VSRREQDEFAIRSHTLASEAAKNGKF-TDVVPVFL--DGKKPKTIKEDNGIRVSTLEKLSSLKPA 269

  Fly   240 LFKKNGVVTAGTASGICDGASAVIVASEEALKEYNLKPLARLVAFSFVGVKP-EIMGIGPVPAIQ 303
            ..|.:|.|||..||.:.|||||.::.:||.......||.|.|..:.:|...| :.:.:.|...|.
 Worm   270 FVKPHGTVTAANASYLTDGASAALIMTEEYALANGYKPKAYLRDYLYVAQDPKDQLLLSPAYVIP 334

  Fly   304 NVLKVSGKKLEDIDLIEINEAFAAQTLA----------CADALK-------LDTSKLNVNGGAIA 351
            .:|..:|..|:|:|:.||:||||.|.||          |.:.:|       :...|||:.||:::
 Worm   335 KLLDKAGLTLKDVDVFEIHEAFAGQVLANLNAMDSDYFCKEQMKRSGKFGRVPMDKLNLWGGSLS 399

  Fly   352 LGHPLGASGSRITGHLVHELQRKKLKYGIGSACIGGGQGIALLLEA 397
            :|||.||:|.|:..|..|.|:.:|.:|.:.:||..||.|:.:|:||
 Worm   400 IGHPFGATGVRLATHSAHRLKEEKGQYAVIAACAAGGHGVGMLIEA 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yip2NP_523528.1 PRK05790 6..398 CDD:180261 133/432 (31%)
thiolase 9..397 CDD:238383 129/423 (30%)
B0303.3NP_498915.1 thiolase 27..445 CDD:238383 129/423 (30%)
AcCoA-C-Actrans 29..444 CDD:273881 129/420 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0183
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1129049at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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