DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yip2 and kat-1

DIOPT Version :9

Sequence 1:NP_523528.1 Gene:yip2 / 34313 FlyBaseID:FBgn0040064 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_495455.2 Gene:kat-1 / 174161 WormBaseID:WBGene00002183 Length:407 Species:Caenorhabditis elegans


Alignment Length:397 Identity:136/397 - (34%)
Similarity:213/397 - (53%) Gaps:9/397 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SAA--TKGIYIVAAKRTAFGTFGGSLKGINQTQLQTTAAKAALDAAGLKGEQVDTVIVGNVIASS 64
            |||  .|..:||.|.||..|:|..||..:...:|.:.|.||||:...:|...:..|.:|.|..::
 Worm    16 SAALSNKHAFIVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEVFLGQVCQAN 80

  Fly    65 STDGIYVPRHVGLNCGVPIEKPALGINRLCGSGFQSIVNGAQDILVGGAKIALTGGVENMSQSPF 129
            :  |....|...|..|:.:......:|::|.||.::|:..||.|..|....|:.||:|:|||.||
 Worm    81 A--GQAPARQAALGAGLDLSVAVTTVNKVCSSGLKAIILAAQQIQTGHQDFAIGGGMESMSQVPF 143

  Fly   130 IARNVRFGTTLGASYNLEDALWAGLTDTYCKLPMALTAENLADQYKISRERVDEFSLLSQKNWEK 194
            ..:  |.....|....::..:..||||.|.|:.|....|..:.:..|:|:..||:::.|.|...|
 Worm   144 YVQ--RGEIPYGGFQVIDGIVKDGLTDAYDKVHMGNCGEKTSKEMGITRKDQDEYAINSYKKSAK 206

  Fly   195 GQKEGAFNAEITPIKLKVKGKEVDFVVDEHPRPKTTIEGLNKLPSLFKKNGVVTAGTASGICDGA 259
            ..:.|....|:.|:.:|.| |.|..|..:....|...:....|.::|:|:|.:||..||.:.|||
 Worm   207 AWENGNIGPEVVPVNVKSK-KGVTIVDKDEEFTKVNFDKFTSLRTVFQKDGTITAANASTLNDGA 270

  Fly   260 SAVIVASEEALKEYNLKPLARLVAFSFVGVKPEIMGIGPVPAIQNVLKVSGKKLEDIDLIEINEA 324
            :||||||:||:.|.:||||||::|:......|....:.|......:|:.:|.|..|:...|:|||
 Worm   271 AAVIVASQEAVSEQSLKPLARILAYGDAATHPLDFAVAPTLMFPKILERAGVKQSDVAQWEVNEA 335

  Fly   325 FAAQTLACADALKLDTSKLNVNGGAIALGHPLGASGSRITGHLVHELQRKKLKYGIGSACIGGGQ 389
            |:...||....|.:|.|.:|.:|||:::|||:|.||:|:..||||.|  |..:.|:.:.|.|||.
 Worm   336 FSCVPLAFIKKLGVDPSLVNPHGGAVSIGHPIGMSGARLITHLVHTL--KSGQIGVAAICNGGGG 398

  Fly   390 GIALLLE 396
            ...::::
 Worm   399 SSGMVIQ 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yip2NP_523528.1 PRK05790 6..398 CDD:180261 133/391 (34%)
thiolase 9..397 CDD:238383 132/388 (34%)
kat-1NP_495455.2 thiolase 25..406 CDD:238383 132/388 (34%)
PLN02644 26..407 CDD:215347 132/387 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0183
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D321628at33208
OrthoFinder 1 1.000 - - FOG0000432
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.