DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yip2 and Hadhb

DIOPT Version :10

Sequence 1:NP_523528.1 Gene:yip2 / 34313 FlyBaseID:FBgn0040064 Length:398 Species:Drosophila melanogaster
Sequence 2:XP_063117589.1 Gene:Hadhb / 171155 RGDID:620513 Length:481 Species:Rattus norvegicus


Alignment Length:421 Identity:127/421 - (30%)
Similarity:186/421 - (44%) Gaps:46/421 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KGIYIVAAKRTAFGTFGGSLKGINQTQLQTTAAKAALDAAGLKGEQVDTVIVGNVIASSSTDGIY 70
            |.|.:|...|..|...|.|.|.:....|...|....|....:..:.||.:|.|.||....|..  
  Rat    53 KNIVVVEGVRIPFLLSGTSYKDLMPHDLARAALSGLLYRTNIPKDVVDYIIFGTVIQEVKTSN-- 115

  Fly    71 VPRHVGLNCGVPIEKPALGINRLCGSGFQSIVNGAQDILVGGAKIALTGGVENMSQSPF-IARNV 134
            |.|...|..|...:.||..:...|.|..|::......|..|...:.:.||||.||..|. .:||:
  Rat   116 VAREAALGAGFSDKTPAHTVTMACISSNQAMTTAVGLIASGQCDVVVAGGVELMSDVPIRHSRNM 180

  Fly   135 R-------FGTTLGASYNLEDALWAGLTDTYCKLP----------MALTAENLADQYKISRERVD 182
            |       ...||....:|...........  :||          |..:|:.||..:.:||...|
  Rat   181 RKMMLDLNKAKTLAQRLSLLTKFRLNFLSP--ELPAVAEFSTNETMGHSADRLAAAFAVSRMEQD 243

  Fly   183 EFSLLSQKNWEKGQKEGAFNAEITPIKLKVKGKEVDFVVDEHPRPKTTIEGLNKL-PSLFKKNGV 246
            :::|.|....:|.|.||.. ::|.|  .||.||:. ...|...|| :::|.:.|| |:..|..|.
  Rat   244 KYALRSHSLAKKAQDEGHL-SDIVP--FKVPGKDT-VSKDNGIRP-SSLEQMAKLKPAFIKPYGT 303

  Fly   247 VTAGTASGICDGASAVIVASEEALKEYNLKPLARLVAFSFVGVKP-EIMGIGPVPAIQNVLKVSG 310
            |||..:|.:.|||||:::.||:.......||.|.|..|.:|...| :.:.:||..|...||:.:|
  Rat   304 VTAANSSFLTDGASAMLIMSEDRALAMGYKPKAYLRDFIYVSQDPKDQLLLGPTYATPKVLEKAG 368

  Fly   311 KKLEDIDLIEINEAFAAQTLACADALKLD-----------------TSKLNVNGGAIALGHPLGA 358
            ..:.|||..|.:|||:.|.||...|:..|                 ..|.|:.||:::||||.||
  Rat   369 LTMNDIDAFEFHEAFSGQILANFKAMDSDWFAQNYMGRKTKVGAPPLEKFNIWGGSLSLGHPFGA 433

  Fly   359 SGSRITGHLVHELQRKKLKYGIGSACIGGGQ 389
            :|.|:.....:.|::...:|.:.:||..|||
  Rat   434 TGCRLVMAAANRLRKDGGQYALVAACAAGGQ 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yip2NP_523528.1 thiolase 9..397 CDD:238383 125/418 (30%)
HadhbXP_063117589.1 None

Return to query results.
Submit another query.