DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Srp54 and CID8

DIOPT Version :9

Sequence 1:	NP_477347.1	Gene:	Srp54 / 34312	FlyBaseID:	FBgn0024285	Length:	513	Species:	Drosophila melanogaster
Sequence 2:	NP_175769.1	Gene:	CID8 / 841802	AraportID:	AT1G53650	Length:	314	Species:	Arabidopsis thaliana

Alignment Length:	219	Identity:	45/219 - (20%)
Similarity:	71/219 - (32%)	Gaps:	64/219 - (29%)

- Green bases have known domain annotations that are detailed below.

  Fly     8 RVIQVTNIAPQATKDQMQTLFGNIGKIEEIRLYPTIRDVSCPVQSRICYVKYTDTTSVPVAQHLT 72
            |.:.|::|....|::.:..||.:.|::.:.|:......|     .|..:|:::|......|..|.
plant   128 RTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRICGDPNSV-----LRFAFVEFSDDQGARSALSLG 187

  Fly    73 NTVFIDRALIVIPVLAIPEEYRALEMLKNGTIVPGLQKPDSKLPPEVINRIEGQLPQQVIKTYDP 137
            .|:.               .|..:.:|.:.|.:
plant   188 GTMI---------------GYYPVRVLPSKTAI-------------------------------- 205

  Fly   138 KLVEFNLPEYPA-LPSFYDARKIEEIRRTIIVCDVKNEWRLDDLMECFQRA-GEVKYARWA--EK 198
                  ||..|. ||...|.|  |...|||...:|......||:...||.| |||...|..  :.
plant   206 ------LPVNPTFLPRSEDER--EMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQV 262

  Fly   199 DNKTYCMIEFCEQTSIIHALRMQG 222
            .:.....:||....|.:.||...|
plant   263 HSTRIAFVEFAMAESAVAALNCSG 286

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Srp54	NP_477347.1	RRM_SRSF11_SREK1	9..85	CDD:240705	14/75 (19%)
Srp54	NP_477347.1	RRM2_SREK1	160..242	CDD:240706	20/66 (30%)
CID8	NP_175769.1	PAM2	57..72	CDD:399847
		RRM1_CID8_like	126..205	CDD:409892	18/96 (19%)
		RRM2_CID8_like	221..302	CDD:409893	20/66 (30%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_105433
Panther	1	1.100	-	-	O	PTHR32343
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.000