DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Srp54 and CID11

DIOPT Version :9

Sequence 1:	NP_477347.1	Gene:	Srp54 / 34312	FlyBaseID:	FBgn0024285	Length:	513	Species:	Drosophila melanogaster
Sequence 2:	NP_001031131.1	Gene:	CID11 / 840173	AraportID:	AT1G32790	Length:	406	Species:	Arabidopsis thaliana

Alignment Length:	270	Identity:	55/270 - (20%)
Similarity:	93/270 - (34%)	Gaps:	74/270 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly     8 RVIQVTNIAPQATKDQMQTLFGNIGKIEEIRLYPTIRDVSCPVQSRICYVKYTDTTSVPVAQHLT 72
            |.:.|:::..|.|::|:..||.:.|::.:.|:......|     .|..::::||......|.:|:
plant   173 RTVYVSDLDQQVTEEQLAGLFVSCGQVVDCRICGDPNSV-----LRFAFIEFTDEEGAMTALNLS 232

  Fly    73 NTVFIDRALIVIPVLAIPEEYRALEMLKNGTIVPGLQKPDSKLPPEVINRIEGQLPQQVIKTYDP 137
            .|:     |...||..:|                      ||.....:|
plant   233 GTM-----LGFYPVKVLP----------------------SKTAIAPVN---------------- 254

  Fly   138 KLVEFNLPEYPALPSFYDARKIEEIRRTIIVCDVKNEWRLDDLMECFQR-AGEVKYAR-WAEKDN 200
                   |.:  ||...|.|  |...|||...::..:....|:...|:. .|||...| ..:..:
plant   255 -------PTF--LPRTEDER--EMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQH 308

  Fly   201 KT-YCMIEFCEQTSIIHALRMQGQEFKGGHLSVYHSTYSITKPEAKSNEAAQAEIEEAMTIVKEA 264
            .| ...:||....|.|.||...|...  |.|.:          .:...:|..:||.||...:..|
plant   309 STRIAFVEFVMAESAIAALNCSGVVL--GSLPI----------RSSFKDACSSEITEASNALILA 361

  Fly   265 QSMISAAIDP 274
            ..:.:..:.|
plant   362 LQVFTYLMSP 371

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Srp54	NP_477347.1	RRM_SRSF11_SREK1	9..85	CDD:240705	16/75 (21%)
Srp54	NP_477347.1	RRM2_SREK1	160..242	CDD:240706	20/84 (24%)
CID11	NP_001031131.1	PAM2	88..105	CDD:284542
		RRM1_CID8_like	171..250	CDD:240905	22/108 (20%)
		RRM2_CID8_like	266..347	CDD:240906	20/92 (22%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR32343
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.010