DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Srp54 and CID13

DIOPT Version :9

Sequence 1:	NP_477347.1	Gene:	Srp54 / 34312	FlyBaseID:	FBgn0024285	Length:	513	Species:	Drosophila melanogaster
Sequence 2:	NP_197832.1	Gene:	CID13 / 832515	AraportID:	AT5G24440	Length:	320	Species:	Arabidopsis thaliana

Alignment Length:	270	Identity:	48/270 - (17%)
Similarity:	87/270 - (32%)	Gaps:	96/270 - (35%)

- Green bases have known domain annotations that are detailed below.

  Fly     8 RVIQVTNIAPQATKDQMQTLFGNIGKIEEIRLYPTIRDVSCPVQSRICYVKYTDTTSVPVAQHLT 72
            |.:.|::|..|.|::|:.:||.:.|::.:.|:....:.:     .|..::::||......|...:
plant   137 RTVYVSDIDNQVTEEQLASLFLSCGQVVDCRMCGDYKSI-----LRFAFIEFTDAEGARSALRKS 196

  Fly    73 NTVFIDRALIVIPVLAIPEEYRALEMLKNGTIVPGLQKPDSKLPPEVINRIEGQLPQQVIKTYDP 137
            .|:|                                                |..|.:|..:
plant   197 GTMF------------------------------------------------GSHPIRVFMS--- 210

  Fly   138 KLVEFNLPEYPALPSFYDARK--IEEIRRTIIVCDVKNEWRLDDLMECFQRAGEVKYARWAEKDN 200
                 .....|..|||....|  :|:..:|:...::..|....:|...|
plant   211 -----KTAIAPVNPSFLPQSKDELEKCGKTVYCTNIDKEVTKMELENFF---------------- 254

  Fly   201 KTYCMIEFCEQTSIIHALRMQGQEFKGGHLSVYHSTYSITKPEAKSNEAAQAEIEEAMTIVKEAQ 265
            ||.|        ..:|.||:.|        ..||.| .|...|.|..|:|.:.:..:..::.|..
plant   255 KTVC--------GEVHHLRLLG--------DFYHQT-RIAFVEFKLAESAISALNCSGVVLGELP 302

  Fly   266 SMISAAIDPV 275
            ..:|.:..||
plant   303 IRVSPSKTPV 312

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Srp54	NP_477347.1	RRM_SRSF11_SREK1	9..85	CDD:240705	15/75 (20%)
Srp54	NP_477347.1	RRM2_SREK1	160..242	CDD:240706	16/81 (20%)
CID13	NP_197832.1	PAM2	64..78	CDD:336618
		RRM1_CID8_like	135..214	CDD:240905	19/137 (14%)
		RRM2_CID8_like	230..311	CDD:240906	22/113 (19%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1342709at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_105433
Panther	1	1.100	-	-	O	PTHR32343
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	3.010