Protein Alignment Srp54 and CID12

DIOPT Version :9

• Sequence 1: NP_477347.1
• Gene: Srp54 / 34312
• FlyBaseID: FBgn0024285
• Length: 513
• Species: Drosophila melanogaster
• Sequence 2: NP_192799.1
• Gene: CID12 / 826653
• AraportID: AT4G10610
• Length: 336
• Species: Arabidopsis thaliana
• Alignment Length: 130
• Identity: 30/130 - (23%)
• Similarity: 58/130 - (44%)
• Gaps: 15/130 - (11%)

  Fly     8 RVIQVTNIAPQATKDQMQTLFGNIGKIEEIRLYPTIRDVSCPVQSRICYVKYTDTTSVPVAQHLT 72
            |.:.|::|..|.|::|:..||...|::.:.|:......|     .|..::::||......|.:|:
plant   150 RTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSV-----LRFAFIEFTDEVGARTALNLS 209

  Fly    73 NTVFIDRALIVIPVLAIPEEYRALEMLKNGTIVPGLQKPDSKLPPEVI--NRIEGQLPQQVIKTY 135
            .|:     |...||..:|.:.....:  |.|.:|..: .:.::....|  ..|:.:|.|..||.:
plant   210 GTM-----LGFYPVKVMPSKTAIAPV--NPTFLPRTE-DEREMCARTIYCTNIDKKLTQTDIKLF 266

  Fly   136  135
            plant   267  266

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Srp54	NP_477347.1	RRM_SRSF11_SREK1	9..85	CDD:240705	17/75 (23%)
		RRM2_SREK1	160..242	CDD:240706
CID12	NP_192799.1	PAM2	74..88	CDD:399847
		RRM1_CID8_like	148..227	CDD:409892	21/86 (24%)
		RRM2_CID8_like	243..324	CDD:409893	6/24 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR32343
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100