DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Srp54 and CID10

DIOPT Version :9

Sequence 1:	NP_477347.1	Gene:	Srp54 / 34312	FlyBaseID:	FBgn0024285	Length:	513	Species:	Drosophila melanogaster
Sequence 2:	NP_001030833.1	Gene:	CID10 / 824101	AraportID:	AT3G49390	Length:	353	Species:	Arabidopsis thaliana

Alignment Length:	217	Identity:	44/217 - (20%)
Similarity:	73/217 - (33%)	Gaps:	61/217 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly     8 RVIQVTNIAPQATKDQMQTLFGNIGKIEEIRLYPTIRDVSCPVQSRICYVKYTDTTSVPVAQHLT 72
            |.:.|::|..|.|::.:..:|.|.|::.:.|:......|     .|..::::|:......|..::
plant   169 RTVYVSDIDQQVTEENLAGVFINCGQVVDCRVCGDPNSV-----LRFAFIEFTNEEGARAALSMS 228

  Fly    73 NTVFIDRALIVIPVLAIPEEYRALEMLKNGTIVPGLQKPDSKLPPEVINRIEGQLPQQVIKTYDP 137
            .||.....|.|:|                           ||.....:|
plant   229 GTVLGFYPLKVLP---------------------------SKTAIAPVN---------------- 250

  Fly   138 KLVEFNLPEYPALPSFYDARKIEEIRRTIIVCDVKNEWRLDDLMECFQR-AGEVKYARWAEKDNK 201
                   |.:  ||...|.|  |...||:...::.......||...|:. .|||...|..:..::
plant   251 -------PTF--LPRSEDER--EMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRLRLGDYHHQ 304

  Fly   202 T-YCMIEFCEQTSIIHALRMQG 222
            | ...:||....|.|.||...|
plant   305 TRIAFVEFAMAESAIAALHCSG 326

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Srp54	NP_477347.1	RRM_SRSF11_SREK1	9..85	CDD:240705	16/75 (21%)
Srp54	NP_477347.1	RRM2_SREK1	160..242	CDD:240706	18/65 (28%)
CID10	NP_001030833.1	RRM	68..287	CDD:223796	31/176 (18%)
		RRM1_CID8_like	167..246	CDD:409892	20/108 (19%)
		RRM2_CID8_like	262..342	CDD:409893	18/65 (28%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR32343
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.010