Sequence 1: | NP_477347.1 | Gene: | Srp54 / 34312 | FlyBaseID: | FBgn0024285 | Length: | 513 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001003613.2 | Gene: | srek1 / 445219 | ZFINID: | ZDB-GENE-040801-132 | Length: | 515 | Species: | Danio rerio |
Alignment Length: | 553 | Identity: | 201/553 - (36%) |
---|---|---|---|
Similarity: | 272/553 - (49%) | Gaps: | 88/553 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MAGGNTPRVIQVTNIAPQATKDQMQTLFGNIGKIEEIRLYPTIRDVSCPVQSRICYVKYTDTTSV 65
Fly 66 PVAQHLTNTVFIDRALIVIPVL--AIPEEYRALEMLKNGTIVPGLQKPDSKLP---PEVI-NRIE 124
Fly 125 GQLPQQ---VIK-TYDPKLVEFN-LPEYPALPSFYDARKIEEIRRTIIVCDVKNE-WRLDDLMEC 183
Fly 184 FQRAGEVKYARWA--EKDNKTYCMIEFCEQTSIIHALRMQGQEFKGGHLSVYHSTYSITKPEAKS 246
Fly 247 NEAAQAEIEEAMTIVKEAQSMISAAIDPVIGMLAKDKRRRSRSRSRSRDRRTSRSRSHRSTSRRR 311
Fly 312 SRRSGSRERRSVSRSRRSRSRGKHSSRSRSKRSRSRHRRSSSRSRRSRSRGGKHSRSSRSR---- 372
Fly 373 --GKRSRSRHRRSTSR----SRSSRSHGTGGGGSGNGKRSRSRERSKKSHRSEKHSSRSPRSRSK 431
Fly 432 RSSPSPPPATGSKSRSSRSK--DPVIVSAKSSRRRDRSRTPETRKLKSISE----------DTEV 484
Fly 485 KSSRSS-ADSKS---------RKSVSVEKSDNM 507 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Srp54 | NP_477347.1 | RRM_SRSF11_SREK1 | 9..85 | CDD:240705 | 43/75 (57%) |
RRM2_SREK1 | 160..242 | CDD:240706 | 27/84 (32%) | ||
srek1 | NP_001003613.2 | RRM1_SREK1 | 9..88 | CDD:240963 | 44/79 (56%) |
RRM2_SREK1 | 167..252 | CDD:240706 | 27/84 (32%) | ||
RRM | <170..>248 | CDD:223796 | 24/77 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170581692 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4676 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 246 | 1.000 | Inparanoid score | I3259 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0003613 | |
OrthoInspector | 1 | 1.000 | - | - | otm26485 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_105433 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR32343 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R5511 |
SonicParanoid | 1 | 1.000 | - | - | X2488 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.780 |