DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Etl1 and Smarca5

DIOPT Version :10

Sequence 1:NP_609320.2 Gene:Etl1 / 34311 FlyBaseID:FBgn0032157 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_444354.2 Gene:Smarca5 / 93762 MGIID:1935129 Length:1051 Species:Mus musculus


Alignment Length:724 Identity:226/724 - (31%)
Similarity:355/724 - (49%) Gaps:139/724 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 PLAKSKLKPRSNGISGGNFSDNDHSDDDDVKQSKDQVYDSDDSDSEM------------------ 176
            |...:..||.:.| :||:.|.|....:.....:......|..:|:||                  
Mouse    12 PPESAPSKPSAAG-AGGSSSGNKGGPEGGAAPAAPCAAGSGPADTEMEEVFDHGSPGKQKEIQEP 75

  Fly   177 ----STKMTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSD--WSDLRQKLESIRMS 235
                ..||...|...|:::.:.:.:....::..::|...:.:.::|...  ..|.:|.|.|:   
Mouse    76 DPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRVKKDEKQNLLSV--- 137

  Fly   236 GDLLNYA------QELINKQNTVAAILSKCNNMVSRLEKAISNGAGIVEQPKLLSSGLQLADYQI 294
            ||..:..      :||:.:.       ||..|:.:|.|          :.|..:..| :|.|||:
Mouse   138 GDYRHRRTEQEEDEELLTES-------SKATNVCTRFE----------DSPSYVKWG-KLRDYQV 184

  Fly   295 IGLNWLTVMHKQEMNGILADEMGLGKTIQVIAFLAYLKENGLSQAAHLIVVPSSTLDNWEAEISR 359
            .|||||..:::..:|||||||||||||:|.|:.|.|:|........|:::||.|||.||.:|..:
Mouse   185 RGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKK 249

  Fly   360 WCPELVVEKYHGSQDERRRMRGRFAKDGFT--GFDVLLTTYHIVGSTPEERKMFRVCKLDYVIFD 422
            |.|.|......|.:::    |..|.:|...  .:||.:|:|.::   .:|:.:|:.....|::.|
Mouse   250 WVPTLRSVCLIGDKEQ----RAAFVRDVLLPGEWDVCVTSYEML---IKEKSVFKKFNWRYLVID 307

  Fly   423 EAHMLKNMTTQRYANLITINARMRILLTGTPLQNNLLELISLLCFVMPKFFAKSIEDIKSLFAKK 487
            |||.:||..::....:.......|:|||||||||||.||.|||.|::|..| .|.:|..|.| ..
Mouse   308 EAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVF-NSADDFDSWF-DT 370

  Fly   488 GKSDGDQDEVSQFQETQIQRAKRIMKPFVLRRLKKDVLKNLPKKLSLVEKVPMSSQQKIYYHEL- 551
            ....|||        ..::|...:::||:|||:|.||.|:||.|..:...|.:|..|:.:|..: 
Mouse   371 NNCLGDQ--------KLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRIL 427

  Fly   552 ---VDYYSNNKGEVCSSSERAGIAIMMEMRRIANHPLLM------RHYFTDANLRGFSKRLANAS 607
               :|.. |:.|::   .:...:.|:|::|:..|||.|.      ..|.||.             
Mouse   428 MKDIDIL-NSAGKM---DKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDM------------- 475

  Fly   608 SFKKTNEQYIFEELAVMSDFQVYQMMNKHEFYDVKIPDNLICDSGKFLYLDTLLPKLKAEGHRVL 672
                                                  :|:.:|||.:.||.||||||.:|.|||
Mouse   476 --------------------------------------HLVTNSGKMVVLDKLLPKLKEQGSRVL 502

  Fly   673 LFSQFTMMLDIVEEYLRIRKFGFCRLDGATAVNVRQDLITDFNGDDSI-FVFLLSTKAGGVGINL 736
            :|||.|.:|||:|:|...|.:.:|||||.|..:.|||.|..:|..:|. |||:|||:|||:||||
Mouse   503 IFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL 567

  Fly   737 TAADTCVIHDIDFNPYNDKQAEDRCHRMGQQRPVTIYRLISESTIEEGILMAAEEKLKLEKDITS 801
            ..||..:::|.|:||..|.||.||.||:||.:.|.::|.|:::|:||.|:..||.||:|:..:. 
Mouse   568 ATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVI- 631

  Fly   802 NEKGEVHEQ 810
             ::|.:.:|
Mouse   632 -QQGRLVDQ 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Etl1NP_609320.2 ComEA <192..233 CDD:441164 6/42 (14%)
HepA <276..795 CDD:440319 192/531 (36%)
Smarca5NP_444354.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..81 12/69 (17%)
PLN03142 68..1011 CDD:215601 214/667 (32%)
DEAH box 307..310 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1014..1051
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.