DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Etl1 and CHD6

DIOPT Version :10

Sequence 1:NP_609320.2 Gene:Etl1 / 34311 FlyBaseID:FBgn0032157 Length:844 Species:Drosophila melanogaster
Sequence 2:XP_016883588.1 Gene:CHD6 / 84181 HGNCID:19057 Length:2716 Species:Homo sapiens


Alignment Length:931 Identity:265/931 - (28%)
Similarity:407/931 - (43%) Gaps:206/931 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 ASPSRTERVPGKKRIQVMADSDSDGNDSQTPKKTKLELTVKEKEERYMAAAKISPHFDTMAIQES 103
            |:....:|.|..||.:...: ..:...::.|||.|.....|:|:    .|.|.....:....:|:
Human   108 AAKGSKDREPKPKRKREPKE-PKEPRKAKEPKKAKEHKEPKQKD----GAKKARKPREASGTKEA 167

  Fly   104 LSRTNWDVAASVRYLRENCKPKGHNGPLAKSKLKPRSN-----------GISGGNF---SDNDHS 154
            ..:.:...:|:....|:..|.:|.. |:.|.|...|.:           |::..:.   .::..|
Human   168 KEKRSCTDSAARTKSRKASKEQGPT-PVEKKKKGKRKSETTVESLELDQGLTNPSLRSPEESTES 231

  Fly   155 DDDDVKQSKDQV----YDSD------DSDSEMSTKMTGQRKKVFQFM-----------NEASLIE 198
            .|...::|..||    |:.|      |.|.|....:...|.......           ::|::||
Human   232 TDSQKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIE 296

  Fly   199 -LQSVKTLSE--------KKALAIIDVRPFS----DWSDLR---------QKLESIR-------- 233
             :.:.||:.|        ...|..:..|.||    .|:.:.         ||::..|        
Human   297 KILASKTVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKH 361

  Fly   234 ----MSGDLLN-------------YAQELINKQNTVAAILSKCN--------------------- 260
                ...||.|             :.::....:.....::..|:                     
Human   362 IFTEPDEDLFNPDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKE 426

  Fly   261 -------NMVSRLEKAISNGAGIVEQPKLLSSGLQLADYQIIGLNWLTVMHKQEMNGILADEMGL 318
                   ..:..:|:..|:....:|:.:...:..||.:||:.|:|||........|.||||||||
Human   427 FESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGL 491

  Fly   319 GKTIQVIAFLAYLKENGLSQAAHLIVVPSSTLDNWEAEISRWCPELVVEKYHGSQDERR-----R 378
            |||||.|.||:.:...|: ....||:.|.||:.|||.|...| .|:....|||||..|:     .
Human   492 GKTIQSITFLSEIFLRGI-HGPFLIIAPLSTITNWEREFRTW-TEMNAIVYHGSQISRQMIQQYE 554

  Fly   379 MRGRFAK----DGFTGFDVLLTTYH-IVGSTPEERKMFRVCKLDYVIFDEAHMLKNMTTQRYANL 438
            |..|.|:    .|...|.|::||:. |:...||.:|:...|    ||.||||.|||...:....|
Human   555 MVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSC----VIIDEAHRLKNRNCKLLEGL 615

  Fly   439 ITINARMRILLTGTPLQNNLLELISLLCFVMPK------FFAKSIEDIKSLFAKKGKSDGDQDEV 497
            ..:....::|||||||||::.||.|||.|:.|.      .|.:...|:|:               
Human   616 KLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDLKT--------------- 665

  Fly   498 SQFQETQIQRAKRIMKPFVLRRLKKDVLKNLPKKLSLVEKVPMSSQQKIYYHELVDYYSNNKGEV 562
                |.|:::.:.|:||.:|||||.||.|||..|...:.:|.:::.||.||..:::   .|...:
Human   666 ----EEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILE---KNFSFL 723

  Fly   563 CSSSERAG----IAIMMEMRRIANHPLLMRHYFTDANLRGFSKRLANASSFKKTNEQYIFEELAV 623
            ...:.:..    |..|||:|:..|||.|         :.|..:::  ...|:||:.       ..
Human   724 TKGANQHNMPNLINTMMELRKCCNHPYL---------INGAEEKI--LEDFRKTHS-------PD 770

  Fly   624 MSDFQVYQMMNKHEFYDVKIPDNLICDSGKFLYLDTLLPKLKAEGHRVLLFSQFTMMLDIVEEYL 688
            ..|||:..|:..               :||.:.:|.|||||.|.||:||:|||....|||:|:||
Human   771 APDFQLQAMIQA---------------AGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYL 820

  Fly   689 RIRKFGFCRLDGATAVNVRQDLITDF-NGDDSIFVFLLSTKAGGVGINLTAADTCVIHDIDFNPY 752
            ..|::.:.|:||....|:||..|..| ..|...|||||.|:|||:||||||||||:|.|.|:||.
Human   821 IQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQ 885

  Fly   753 NDKQAEDRCHRMGQQRPVTIYRLISESTIEEGILMAAEEKLKLEKDITS--NEKGEVHEQRCVVK 815
            ||.||:.||||:||.:.|.:||||:.::.|..:...|..||.|:|.:..  |.||..:..:.:.|
Human   886 NDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSK 950

  Fly   816 ------LLTTALGLDKDQEEQ 830
                  |...|.|...|:|::
Human   951 MEVEDLLRKGAYGALMDEEDE 971

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Etl1NP_609320.2 ComEA <192..233 CDD:441164 13/62 (21%)
HepA <276..795 CDD:440319 200/539 (37%)
CHD6XP_016883588.1 PTZ00449 <105..374 CDD:185628 51/271 (19%)
CD1_tandem_CHD5-9_like 289..354 CDD:349315 13/64 (20%)
CD2_tandem_CHD5-9_like 373..431 CDD:349310 1/57 (2%)
PLN03142 461..>986 CDD:215601 210/572 (37%)
DEXHc_CHD6 462..683 CDD:350816 90/245 (37%)
PHA03247 <2320..2694 CDD:223021
BRK 2403..2438 CDD:470653
Blue background indicates that the domain is not in the aligned region.

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