DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Etl1 and ATRX

DIOPT Version :10

Sequence 1:NP_609320.2 Gene:Etl1 / 34311 FlyBaseID:FBgn0032157 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_001184937.1 Gene:ATRX / 837382 AraportID:AT1G08600 Length:1479 Species:Arabidopsis thaliana


Alignment Length:888 Identity:232/888 - (26%)
Similarity:370/888 - (41%) Gaps:179/888 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 DSQTPKKTKLELTVKEK-EERYMAAAKISPHFDTMAIQESLSRTNWDVAASVRYLRENCKPKGHN 128
            |.:|.:|......:|.. .|.||:.|:.|               .||...        |.|.   
plant   538 DCRTCEKLFCASCIKRNIGEEYMSEAQSS---------------GWDCCC--------CSPI--- 576

  Fly   129 GPLAKSKLK-------PRSNGISGGNFSDNDHSDDDDVKQSKDQVYDSDDSDSEMSTKMTGQ--- 183
             ||.:..|:       .:|..:|..:.||:. ||::.|           |:|::::..::.:   
plant   577 -PLQRLTLELEKAMRDKKSIELSSDSSSDSS-SDNNSV-----------DTDADVNVTISSKKKS 628

  Fly   184 RKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIRMSGDLLNYAQ----E 244
            :||:.:.:::|.|.:....|...||.....:....||      .:.::|...||:.:..:    |
plant   629 KKKIRRIIDDAELGKDTRTKIAIEKARQERLRSLQFS------ARYKTISSMGDVKSIPEGAEVE 687

  Fly   245 LINKQNTVAAILSKCNNMVSRLEKAISNGAGIVEQPKLLSSGLQLADYQIIGLN--WLTVMHK-- 305
            ::...::...:     |:|..:      |...|..|:.:|:.|::  :|:.|:.  |..::..  
plant   688 VLGDAHSGYIV-----NVVREI------GEEAVRVPRSISAKLKV--HQVTGIRFMWENIIQSIS 739

  Fly   306 ------QEMNGILADEMGLGKTIQVIAFLAYLK----ENGLSQAAHLIVVPSSTLDNWEAEISRW 360
                  :.:..|||..||||||.|||||| |..    :.||..|  |||.|.:.|.||.:|..:|
plant   740 RVKSGDKGLGCILAHTMGLGKTFQVIAFL-YTAMRCVDLGLKTA--LIVTPVNVLHNWRSEFEKW 801

  Fly   361 CPE----LVVEKYHGSQDERR-------RMRGRFAKDGFTGFDVLLTTYHIVGSTPEERKMFR-V 413
            .|.    |.:........|||       |.:|.....|:|.|..|     .:|...::....| :
plant   802 MPSEVKPLRIFMLGDVSRERRFDLLTKWRKKGGVFLMGYTNFRNL-----SLGRGVKDLNAARGI 861

  Fly   414 CKL-----DYVIFDEAHMLKNMTTQRYANLITINARMRILLTGTPLQNNLLELISLLCFVMPKFF 473
            |..     |.::.||||::||........|..:..:.||.|||:||||||:|...::.||...|.
plant   862 CNALRDGPDILVCDEAHIIKNTKADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 926

  Fly   474 AKSIEDIKSLFAKKGKSDGDQDEVSQFQETQIQRAKRI---MKPFVLRRLKKDVLKNLPKKLSLV 535
            ..|.| .::.|....::....:..::..:...||:..:   :|.||.|.....|.|:||.|...|
plant   927 GSSPE-FRNRFQNPIENGQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFV 990

  Fly   536 EKVPMSSQQKIYYHELVDYYSNNKGEVCSSSERAGIAIMMEMRRIANHPLL--MRHYFTDANLRG 598
            ..|.:|..|:|.|...::.|..:.|.......:...|....:.:|.|||.:  :|...:....||
plant   991 ISVKLSPLQRILYQRFLELYGFSDGRTDERMRKNFFAAYQVLAQILNHPGIPQLRSEDSKNGRRG 1055

  Fly   599 FSKRLANASSFKKTNEQYIF---EELAVMSDFQ--VYQMMNKHEFYDVKIPDNL-ICD-SGKFLY 656
            ....:.:..| ...|..|..   |:...|:|.|  |...:.|..:.|:...:|. :.| |||.:.
plant  1056 SIVDIPDDCS-SDENIDYNMVTGEKQRTMNDLQDKVDGYLQKDWWVDLLQKNNYKVSDFSGKMIL 1119

  Fly   657 LDTLLPKLKAEGHRVLLFSQFTMMLDIVEEYL-RIRKFG-----------FCRLDGATAVNVRQD 709
            |..:|......|.:.|:|||....||::|.|| |:.:.|           :.|:||.|..:.||.
plant  1120 LLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQK 1184

  Fly   710 LITDFNGDDS--IFVFLLSTKAGGVGINLTAADTCVIHDIDFNPYNDKQAEDRCHRMGQQRPVTI 772
            |:..||..|:  :...|:||:||.:||||.||:..:|.|..:||..|.||..|..|.||::||..
plant  1185 LVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFA 1249

  Fly   773 YRLISESTIEEGI----------------------LMAAEEKLKLEKDITSNEKGEV-------- 807
            |||::..||||.|                      .::.||.|.|.:....:||.|.        
plant  1250 YRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFDDDDEKSEAVTEISKQN 1314

  Fly   808 ---HEQRCVVKLLTT------ALGLDKDQEEQLNNSLNNSIAS 841
               |.......:|.|      .:|.||..|..|.....|.|:|
plant  1315 EAGHSNLVEQAILWTKKATLSRVGGDKLMENLLQRHGPNWISS 1357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Etl1NP_609320.2 ComEA <192..233 CDD:441164 7/40 (18%)
HepA <276..795 CDD:440319 176/597 (29%)
ATRXNP_001184937.1 PRK02224 <1..>195 CDD:179385
ADDz_ATRX 481..575 CDD:277252 12/59 (20%)
HepA <701..1278 CDD:440319 175/594 (29%)
DEXHc_ARIP4 719..959 CDD:350827 72/250 (29%)
Blue background indicates that the domain is not in the aligned region.

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