DRSC/TRiP Functional Genomics Resources

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Protein Alignment Etl1 and RAD5

DIOPT Version :10

Sequence 1:NP_609320.2 Gene:Etl1 / 34311 FlyBaseID:FBgn0032157 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_197667.1 Gene:RAD5 / 832338 AraportID:AT5G22750 Length:1029 Species:Arabidopsis thaliana


Alignment Length:783 Identity:191/783 - (24%)
Similarity:292/783 - (37%) Gaps:276/783 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 LSKCNNM-----VSRLEKAISNG-----AGIVEQPKLLSSGL-----------QLADYQIIGLNW 299
            |:|..||     ....|:.||:|     .|:.:     ||||           :|..||...|:|
plant   299 LNKVKNMNQDANGDENEQCISDGDLDNIVGVGD-----SSGLKEMETPHTLLCELRPYQKQALHW 358

  Fly   300 L-------------TVMH----------KQEM-----------------------NGILADEMGL 318
            :             |::|          |:|:                       .|||||.|||
plant   359 MTQLEKGNCTDEAATMLHPCWEAYCLADKRELVVYLNSFTGDATIHFPSTLQMARGGILADAMGL 423

  Fly   319 GKTIQVIA-----------------------------------------FLAYLK-----ENGLS 337
            |||:..|:                                         ||.:.|     ::.|.
plant   424 GKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKFLGFDKRLLEQKSVLQ 488

  Fly   338 QAAHLIVVPSSTLDNWEAEISRWCP--ELVVEKYHGSQDERRRMRGRFAKDGFTGFDVLLTTYHI 400
            ...:|||.|.:.|..|:.||.....  .|.|..::|      :.|.:.|| ..:..||::|||.:
plant   489 NGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYG------QSRPKDAK-LLSQSDVVITTYGV 546

  Fly   401 VGSTPEER-----------KMFRVCKLDYVIFDEAHMLKNMTTQRYANLITINARMRILLTGTPL 454
            :.|...:.           :.||      ::.||||.:||..:|.......:.|..|..|||||:
plant   547 LTSEFSQENSADHEGIYAVRWFR------IVLDEAHTIKNSKSQISLAAAALVADRRWCLTGTPI 605

  Fly   455 QNNLLELISLLCF--VMP--------KFFAKSIEDIKSLFAKKGKSDGDQDEVSQFQETQIQRAK 509
            ||||.:|.|||.|  :.|        |...|..|            :||        |..::..:
plant   606 QNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFE------------EGD--------ERGLKLVQ 650

  Fly   510 RIMKPFVLRRLKKDVLKN------LPKKLSLVEKVPMSSQQKIYYHELVDYYSNNKGEVCSSSER 568
            .|:||.:|||.|....:.      ||...:.|....:|..::.:|..|   :..:|.:.....|:
plant   651 SILKPIMLRRTKSSTDREGRPILVLPPADARVIYCELSESERDFYDAL---FKRSKVKFDQFVEQ 712

  Fly   569 AGI--------AIMMEMRRIANHPLLMRHYFTDA---NLRGFSKRLANASSFKKTNE-------- 614
            ..:        .:::.:|:..:||.|:......|   :|...|||..:..|.....|        
plant   713 GKVLHNYASILELLLRLRQCCDHPFLVMSRGDTAEYSDLNKLSKRFLSGKSSGLEREGKDVPSEA 777

  Fly   615 --QYIFEEL-----------------AVMSDFQ----------------------VYQMMNKHEF 638
              |.:.|||                 ||::...                      ....::|.|.
plant   778 FVQEVVEELRKGEQGECPICLEALEDAVLTPCAHRLCRECLLASWRNSTSGLCPVCRNTVSKQEL 842

  Fly   639 --------YDVKIPDNLICDSGKFLYLDTLLPKLKAEGHRVLLFSQFTMMLDIVEEYLRIRKFGF 695
                    :.|.:..|.: :|.|...|...|..|::.|.:.:||||:|..||:::..|....|.|
plant   843 ITAPTESRFQVDVEKNWV-ESSKITALLEELEGLRSSGSKSILFSQWTAFLDLLQIPLSRNNFSF 906

  Fly   696 CRLDGATAVNVRQDLITDFNGDDSIFVFLLSTKAGGVGINLTAADTCVIHDIDFNPYNDKQAEDR 760
            .||||..:...|:.::.:|:.|.||.|.|:|.||||||||||||....:.|..:||..::||..|
plant   907 VRLDGTLSQQQREKVLKEFSEDGSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMR 971

  Fly   761 CHRMGQQRPVTIYRLISESTIEEGILMAAEEKLKLEKDITSNEKGEVHEQRCVVKLLTTALGLDK 825
            .||:||.:.|.|.|.|.:.|:||.:                 |..:..:||.:...||       
plant   972 IHRIGQTKEVKIRRFIVKGTVEERM-----------------EAVQARKQRMISGALT------- 1012

  Fly   826 DQE 828
            |||
plant  1013 DQE 1015

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Etl1NP_609320.2 ComEA <192..233 CDD:441164
HepA <276..795 CDD:440319 174/718 (24%)
RAD5NP_197667.1 UBA_like_SF 9..48 CDD:473871
HIRAN 116..224 CDD:400928
HepA <339..1011 CDD:440319 173/725 (24%)
RING_Ubox 789..842 CDD:473075 3/52 (6%)
Blue background indicates that the domain is not in the aligned region.

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